This page shows detailed deep learning-derived predictions and motifs for CTCF in spleen using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000884.1 |
| Cell line/tissue: | spleen |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR225YGX |
| Model: | BPNet |
| A [ | 4.17e-03 | -1.33e-03 | -6.66e-04 | 2.32e-02 | -1.32e-03 | -3.45e-03 | 6.35e-02 | -2.14e-04 | 1.41e-02 | -2.71e-03 | -5.34e-04 | -1.02e-03 | -2.13e-03 | 6.33e-03 | -2.32e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | -2.13e-03 | 7.44e-02 | 1.40e-01 | -5.30e-04 | 4.67e-02 | 1.15e-02 | -9.91e-05 | -3.10e-05 | -4.08e-05 | 2.42e-04 | 1.58e-05 | 1.39e-04 | 6.89e-02 | -6.51e-04 | 2.18e-02 | ] |
| G [ | 1.76e-02 | -1.34e-03 | -1.40e-04 | 6.28e-03 | 1.08e-02 | -1.59e-03 | 2.34e-04 | 1.35e-01 | 5.38e-02 | 4.08e-02 | 1.25e-01 | 8.39e-02 | -3.56e-04 | 4.34e-02 | 9.49e-03 | ] |
| T [ | -3.54e-03 | -2.12e-03 | -4.23e-04 | -4.51e-03 | -1.46e-03 | 1.49e-02 | -1.62e-03 | -1.85e-04 | -2.90e-04 | 5.52e-03 | -4.24e-04 | -1.14e-05 | -2.56e-03 | -2.15e-03 | -4.94e-04 | ] |
| A [ | 7346 | 2447 | 17 | 19671 | 1292 | 3903 | 24646 | 10 | 11681 | 1080 | 147 | 466 | 2968 | 11672 | 2792 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 2909 | 21290 | 26957 | 922 | 15985 | 11661 | 496 | 1 | 129 | 799 | 27 | 651 | 21755 | 1060 | 12841 | ] |
| G [ | 11951 | 1594 | 4 | 3193 | 9086 | 1899 | 1102 | 26968 | 14969 | 15691 | 26743 | 23993 | 507 | 13009 | 8927 | ] |
| T [ | 4777 | 1652 | 5 | 3197 | 619 | 9520 | 739 | 4 | 204 | 9413 | 66 | 1873 | 1753 | 1242 | 2423 | ] |
