This page shows detailed deep learning-derived predictions and motifs for CTCF in H54 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000886.1 |
| Cell line/tissue: | H54 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DKN |
| Model: | BPNet |
| A [ | -2.41e-03 | -1.32e-03 | 2.00e-02 | -1.99e-03 | -4.71e-03 | 6.40e-02 | -4.48e-04 | 1.36e-02 | -5.65e-03 | -1.10e-03 | -1.93e-03 | -4.45e-03 | 6.32e-03 | -3.23e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.65e-02 | 1.70e-01 | 8.61e-04 | 5.46e-02 | 1.44e-02 | -3.91e-04 | -1.03e-04 | -1.97e-04 | -3.83e-04 | -2.81e-05 | 9.62e-04 | 9.30e-02 | 4.53e-04 | 3.52e-02 | ] |
| G [ | -1.40e-03 | -5.60e-04 | 5.14e-03 | 1.34e-02 | -1.63e-03 | 1.44e-03 | 1.73e-01 | 7.64e-02 | 5.83e-02 | 1.69e-01 | 1.13e-01 | -1.15e-04 | 5.65e-02 | 1.17e-02 | ] |
| T [ | -3.18e-03 | -9.28e-04 | -5.85e-03 | -2.35e-03 | 1.64e-02 | -2.34e-03 | -4.20e-04 | -7.98e-04 | 3.84e-03 | -6.96e-04 | -5.50e-04 | -3.07e-03 | -3.33e-03 | -1.24e-03 | ] |
| A [ | 6223 | 1058 | 40452 | 4575 | 10512 | 49030 | 862 | 22174 | 5401 | 1108 | 2328 | 10044 | 24549 | 6589 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 48165 | 62153 | 4071 | 33423 | 24812 | 2281 | 220 | 741 | 2617 | 398 | 3666 | 45100 | 4836 | 30937 | ] |
| G [ | 4910 | 293 | 8267 | 23290 | 6507 | 7216 | 62170 | 39953 | 35509 | 61402 | 52612 | 2971 | 30362 | 18843 | ] |
| T [ | 4540 | 334 | 11048 | 2549 | 22007 | 5311 | 586 | 970 | 20311 | 930 | 5232 | 5723 | 4091 | 7469 | ] |
