This page shows detailed deep learning-derived predictions and motifs for CTCF in brain using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000887.1 |
| Cell line/tissue: | brain |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR225KOS |
| Model: | BPNet |
| A [ | -1.39e-03 | -4.40e-03 | -3.46e-03 | -6.11e-04 | -8.00e-04 | 4.37e-03 | -7.16e-04 | -3.80e-04 | -2.77e-03 | 1.78e-02 | -2.35e-03 | -5.34e-03 | -8.78e-04 | -3.03e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.26e-02 | 5.27e-02 | -5.07e-04 | 1.17e-01 | 1.72e-01 | 6.03e-02 | 8.28e-02 | 1.87e-01 | 1.21e-03 | -2.05e-03 | 1.40e-02 | 6.26e-03 | -5.06e-04 | -1.81e-03 | ] |
| G [ | 3.08e-02 | -8.25e-05 | 8.30e-02 | 6.59e-04 | -6.25e-05 | -2.47e-05 | -1.17e-04 | -5.74e-05 | -1.66e-04 | 1.84e-02 | 5.70e-02 | 2.19e-04 | 1.74e-01 | 8.65e-02 | ] |
| T [ | -2.90e-03 | 8.79e-03 | -3.29e-03 | -2.05e-03 | -1.21e-03 | -5.32e-03 | 1.80e-02 | -3.68e-04 | 7.54e-02 | -4.73e-03 | -2.14e-03 | 2.45e-02 | -1.55e-03 | -1.68e-03 | ] |
| A [ | 8212 | 4663 | 6353 | 5808 | 1151 | 20385 | 842 | 376 | 4982 | 22575 | 2711 | 11022 | 83 | 4735 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 19728 | 31437 | 3862 | 53439 | 62690 | 36396 | 41024 | 64626 | 6682 | 6488 | 23774 | 9511 | 88 | 5137 | ] |
| G [ | 30259 | 5431 | 43905 | 4224 | 639 | 3420 | 765 | 121 | 2569 | 25759 | 34689 | 3811 | 65328 | 49263 | ] |
| T [ | 7661 | 24329 | 11740 | 2389 | 1380 | 5659 | 23229 | 737 | 51627 | 11038 | 4686 | 41516 | 361 | 6725 | ] |