Detailed information of deep learning profile BP000888.1

This page shows detailed deep learning-derived predictions and motifs for NFIB in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NFIB
Model ID: BP000888.1
Cell line/tissue: MCF-7
Class: SMAD/NF-1 DNA-binding domain factors
Family: Nuclear factor 1
Best Match(es): MA1643.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: O00712  
Source: ENCSR582ZOA
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.19e-03 -2.33e-04 -9.59e-07 -5.86e-06 3.55e-04 1.07e-02 -2.51e-03 -2.74e-03 -4.37e-04 -1.18e-03 -2.48e-05 -1.21e-05 -3.27e-07 9.35e-02 1.43e-02 ]
C [ 6.85e-03 -8.08e-06 2.76e-06 7.21e-07 1.05e-01 -1.52e-03 7.47e-03 3.41e-03 1.09e-03 -9.98e-05 -5.27e-05 1.54e-01 1.57e-01 -1.04e-04 -2.40e-03 ]
G [ -1.05e-03 -2.53e-04 1.55e-01 1.49e-01 -1.39e-04 -3.02e-04 1.60e-03 3.76e-03 7.52e-03 -1.57e-03 1.12e-01 0.00e+00 -1.02e-06 -1.05e-05 2.48e-02 ]
T [ 4.71e-02 8.96e-02 -4.74e-07 -1.91e-05 -8.52e-05 -1.09e-03 -5.05e-04 -2.56e-03 -2.22e-03 1.73e-02 1.78e-04 1.37e-07 -1.99e-06 -3.22e-04 -2.58e-03 ]

Frequency matrix

A [ 1575 358 31 200 1248 12951 4682 7083 6906 8108 48 81 50 25344 11751 ]
C [ 12148 173 28 53 26192 5412 9621 6796 6569 1103 87 27377 27556 1730 1425 ]
G [ 1237 1908 27541 27278 149 1121 6509 6789 9485 5300 26679 36 28 156 12784 ]
T [ 12695 25216 55 124 66 8171 6843 6988 4695 13144 841 161 21 425 1695 ]

2 profiles found for the same TF (NFIB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000219.1 NFIB ENCSR414WBQ HepG2 Homo sapiens
BP000409.1 NFIB ENCSR702BYX MCF-7 Homo sapiens
Showing 2 profiles of page 1 from 1 pages
  • 1 (current)