Detailed information of deep learning profile BP000888.1

This page shows detailed deep learning-derived predictions and motifs for NFIB in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NFIB
Model ID: BP000888.1
Cell line/tissue: MCF-7
Class: SMAD/NF-1 DNA-binding domain factors
Family: Nuclear factor 1
Best Match(es): MA1643.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: O00712  
Source: ENCSR582ZOA
Model: BPNet

Contribution weight matrix (CWM)

A [ -2.58e-03 -3.22e-04 -1.99e-06 1.37e-07 1.78e-04 1.73e-02 -2.22e-03 -2.56e-03 -5.05e-04 -1.09e-03 -8.52e-05 -1.91e-05 -4.74e-07 8.96e-02 4.71e-02 ]
C [ 2.48e-02 -1.05e-05 -1.02e-06 0.00e+00 1.12e-01 -1.57e-03 7.52e-03 3.76e-03 1.60e-03 -3.02e-04 -1.39e-04 1.49e-01 1.55e-01 -2.53e-04 -1.05e-03 ]
G [ -2.40e-03 -1.04e-04 1.57e-01 1.54e-01 -5.27e-05 -9.98e-05 1.09e-03 3.41e-03 7.47e-03 -1.52e-03 1.05e-01 7.21e-07 2.76e-06 -8.08e-06 6.85e-03 ]
T [ 1.43e-02 9.35e-02 -3.27e-07 -1.21e-05 -2.48e-05 -1.18e-03 -4.37e-04 -2.74e-03 -2.51e-03 1.07e-02 3.55e-04 -5.86e-06 -9.59e-07 -2.33e-04 -1.19e-03 ]

Frequency matrix

A [ 1695 425 21 161 841 13144 4695 6988 6843 8171 66 124 55 25216 12695 ]
C [ 12784 156 28 36 26679 5300 9485 6789 6509 1121 149 27278 27541 1908 1237 ]
G [ 1425 1730 27556 27377 87 1103 6569 6796 9621 5412 26192 53 28 173 12148 ]
T [ 11751 25344 50 81 48 8108 6906 7083 4682 12951 1248 200 31 358 1575 ]

2 profiles found for the same TF (NFIB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000219.1 NFIB ENCSR414WBQ HepG2 Homo sapiens
BP000409.1 NFIB ENCSR702BYX MCF-7 Homo sapiens
Showing 2 profiles of page 1 from 1 pages
  • 1 (current)