This page shows detailed deep learning-derived predictions and motifs for CTCF in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000892.1 |
| Cell line/tissue: | HCT116 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR240PRQ |
| Model: | BPNet |
| A [ | -9.44e-04 | -2.78e-03 | -2.14e-03 | -1.82e-04 | -3.61e-04 | 4.97e-03 | -7.05e-04 | -4.12e-04 | -1.70e-03 | 1.80e-02 | -2.01e-03 | -4.32e-03 | -1.03e-03 | -2.45e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.00e-03 | 4.87e-02 | -1.19e-03 | 1.00e-01 | 1.47e-01 | 4.25e-02 | 7.37e-02 | 1.55e-01 | 8.53e-04 | -2.43e-03 | 1.07e-02 | 4.47e-03 | -7.35e-04 | -2.37e-03 | ] |
| G [ | 2.86e-02 | -9.10e-04 | 7.73e-02 | -5.18e-04 | -2.51e-05 | -5.15e-04 | -3.10e-04 | -8.42e-05 | -4.16e-04 | 1.41e-02 | 4.24e-02 | 5.32e-04 | 1.47e-01 | 7.80e-02 | ] |
| T [ | -2.18e-03 | 8.15e-03 | -3.23e-03 | -9.43e-04 | -5.50e-04 | -5.73e-03 | 1.07e-02 | -3.96e-04 | 6.79e-02 | -3.79e-03 | -1.10e-03 | 2.23e-02 | -1.24e-03 | -1.46e-03 | ] |
| A [ | 5853 | 3156 | 5105 | 4079 | 292 | 20000 | 579 | 395 | 3763 | 20322 | 2234 | 9867 | 764 | 4054 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 16829 | 28210 | 1673 | 50750 | 56422 | 30719 | 36121 | 56151 | 4861 | 5129 | 21088 | 7345 | 784 | 4128 | ] |
| G [ | 28541 | 3144 | 41818 | 1396 | 74 | 1501 | 284 | 103 | 1359 | 22739 | 29152 | 3704 | 53416 | 42753 | ] |
| T [ | 6031 | 22744 | 8658 | 1028 | 466 | 5035 | 20269 | 605 | 47271 | 9064 | 4779 | 36338 | 2290 | 6319 | ] |
