Detailed information of deep learning profile BP000895.1

This page shows detailed deep learning-derived predictions and motifs for NR2C2 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR2C2
Model ID: BP000895.1
Cell line/tissue: K562
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Best Match(es): MA0504.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P49116  
Source: ENCSR516SWI
Model: BPNet

Contribution weight matrix (CWM)

A [ -2.76e-04 4.51e-04 2.69e-02 1.67e-03 -7.79e-05 -9.48e-05 -4.08e-05 -3.30e-05 1.62e-04 3.96e-02 1.62e-03 -2.46e-04 -8.62e-05 ]
C [ 2.76e-03 -3.15e-04 8.22e-04 2.86e-02 3.60e-02 8.41e-04 3.05e-03 8.50e-04 -4.27e-04 2.04e-04 3.55e-02 3.33e-02 6.46e-03 ]
G [ 2.33e-04 2.27e-02 1.31e-04 1.72e-04 1.61e-04 2.67e-04 -8.39e-05 1.13e-04 3.22e-02 -3.58e-05 -5.75e-05 2.03e-04 1.38e-04 ]
T [ 1.96e-02 -1.42e-04 -2.07e-04 -2.19e-04 -1.09e-04 2.17e-02 1.34e-02 3.85e-02 -1.10e-04 -8.05e-05 -1.14e-04 -3.94e-04 1.43e-02 ]

Frequency matrix

A [ 236 667 2421 673 164 174 252 16 278 3553 348 82 44 ]
C [ 936 622 849 2899 3461 992 1664 164 260 357 3598 3731 1569 ]
G [ 445 2351 509 259 172 304 321 16 3437 108 36 92 121 ]
T [ 2429 407 267 215 249 2576 1809 3850 71 28 64 141 2312 ]

4 profiles found for the same TF (NR2C2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000260.1 NR2C2 ENCSR000EVS HepG2 Homo sapiens
BP000295.1 NR2C2 ENCSR559ZKI HepG2 Homo sapiens
BP000407.1 NR2C2 ENCSR454GVT WTC11 Homo sapiens
BP001251.1 NR2C2 ENCSR750LYM K562 Homo sapiens
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