Detailed information of deep learning profile BP000896.1

This page shows detailed deep learning-derived predictions and motifs for ESR1 in Ishikawa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ESR1
Model ID: BP000896.1
Cell line/tissue: Ishikawa
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0112.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P03372  
Source: ENCSR000BQR
Model: BPNet

Contribution weight matrix (CWM)

A [ -6.98e-04 5.53e-03 4.97e-05 -8.59e-05 -4.88e-06 1.76e-06 2.66e-02 -3.35e-04 -9.24e-04 -1.18e-04 1.73e-04 8.57e-04 2.14e-03 5.51e-04 -4.50e-04 ]
C [ 4.33e-03 8.21e-05 8.22e-06 3.32e-06 2.05e-05 3.33e-02 0.00e+00 3.75e-03 1.39e-03 7.57e-04 2.66e-03 3.04e-04 3.84e-03 6.95e-03 9.00e-03 ]
G [ -8.67e-05 4.90e-03 2.67e-02 3.13e-02 8.02e-05 3.02e-05 1.25e-04 4.32e-04 1.03e-03 4.60e-03 2.57e-04 6.94e-03 1.64e-04 1.35e-04 8.16e-04 ]
T [ 1.26e-03 -8.63e-05 -3.63e-05 -9.95e-06 2.39e-02 2.70e-05 -2.91e-06 3.43e-04 1.21e-03 -2.87e-04 1.98e-03 8.17e-06 -5.57e-04 -2.10e-04 -3.08e-04 ]

Frequency matrix

A [ 1354 3285 194 31 18 7 5432 978 1480 1042 1682 1525 1283 1316 1193 ]
C [ 1690 228 2 4 25 5493 0 2089 1218 1311 1387 1273 1768 1908 1944 ]
G [ 1035 1846 5119 5516 330 6 118 1403 1319 1978 1095 1667 1237 965 1178 ]
T [ 1481 200 245 9 5187 54 10 1090 1543 1229 1396 1095 1272 1371 1245 ]

Alternative motif patterns (AMPs)

5 profiles found for the same TF (ESR1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000282.1 ESR1 ENCSR000BQD T47D Homo sapiens
BP000481.1 ESR1 ENCSR000BKN T47D Homo sapiens
BP000854.1 ESR1 ENCSR000BIY Ishikawa Homo sapiens
BP001071.1 ESR1 ENCSR463GOT MCF-7 Homo sapiens
BP001259.1 ESR1 ENCSR000BJS T47D Homo sapiens
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