This page shows detailed deep learning-derived predictions and motifs for CTCF in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000897.1 |
| Cell line/tissue: | HCT116 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR059BCO |
| Model: | BPNet |
| A [ | -5.20e-04 | 2.16e-03 | -2.15e-03 | -1.77e-03 | -6.06e-04 | 7.45e-04 | 5.91e-04 | 3.88e-04 | -1.51e-03 | -4.03e-03 | -4.36e-03 | 6.61e-03 | -1.12e-03 | -6.15e-04 | 2.78e-02 | -1.18e-03 | -3.77e-03 | 7.24e-02 | -2.56e-04 | 7.31e-03 | -3.65e-03 | -1.20e-03 | -1.44e-03 | -1.24e-03 | 4.89e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | -2.79e-03 | 1.31e-03 | 2.59e-02 | 1.25e-02 | 6.41e-03 | 2.62e-03 | -1.16e-04 | -7.61e-04 | 2.69e-03 | 1.26e-02 | 5.29e-03 | -2.49e-03 | 9.39e-02 | 1.56e-01 | -4.10e-05 | 5.39e-02 | 1.37e-02 | -3.29e-04 | -4.08e-05 | -1.46e-04 | -3.93e-04 | -2.90e-04 | 9.73e-04 | 4.97e-02 | 6.39e-04 | ] |
| G [ | -1.10e-03 | -2.05e-03 | -2.94e-03 | -1.86e-03 | -9.99e-04 | -1.30e-03 | -5.36e-04 | -1.05e-03 | -1.66e-04 | -2.46e-03 | 8.24e-03 | 1.33e-02 | -1.56e-03 | -2.78e-04 | 3.76e-03 | 1.03e-02 | -1.63e-03 | 7.65e-04 | 1.56e-01 | 7.45e-02 | 4.68e-02 | 1.21e-01 | 7.18e-02 | 1.89e-04 | 3.04e-02 | ] |
| T [ | 2.55e-02 | 3.18e-03 | 5.08e-04 | 5.78e-05 | -1.60e-03 | -5.59e-04 | 1.00e-03 | 3.30e-03 | 1.31e-03 | 8.91e-03 | -2.26e-03 | -3.96e-03 | -1.90e-03 | -5.07e-04 | -4.81e-03 | -1.57e-03 | 2.00e-02 | -1.71e-03 | -2.00e-04 | -6.00e-04 | 2.53e-03 | -1.01e-03 | -7.76e-04 | -2.24e-03 | -2.38e-03 | ] |
| A [ | 7261 | 9762 | 7014 | 8742 | 10341 | 10930 | 10723 | 10952 | 9273 | 5465 | 8417 | 12297 | 3248 | 345 | 29573 | 2375 | 5958 | 36408 | 139 | 13486 | 3156 | 921 | 2615 | 7418 | 15654 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 6363 | 10209 | 19035 | 15452 | 13610 | 12100 | 10857 | 9448 | 11094 | 14132 | 9156 | 4331 | 35038 | 41605 | 1612 | 24863 | 17488 | 844 | 29 | 196 | 1623 | 760 | 2738 | 27088 | 4247 | ] |
| G [ | 8872 | 9100 | 5782 | 6731 | 8909 | 9442 | 9005 | 8283 | 10391 | 5373 | 14842 | 17819 | 1743 | 35 | 4648 | 13735 | 2663 | 2678 | 41793 | 27794 | 23915 | 38973 | 32726 | 2870 | 18631 | ] |
| T [ | 19541 | 12965 | 10205 | 11112 | 9176 | 9565 | 11452 | 13354 | 11279 | 17067 | 9623 | 7590 | 2008 | 52 | 6203 | 1063 | 15928 | 2106 | 76 | 561 | 13343 | 1383 | 3957 | 4661 | 3505 | ] |
