This page shows detailed deep learning-derived predictions and motifs for SRF in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | SRF |
| Model ID: | BP000898.1 |
| Cell line/tissue: | HCT116 |
| Class: | MADS box factors |
| Family: | Responders to external signals (SRF/RLM1) |
| Best Match(es): | MA0083.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P11831 |
| Source: | ENCSR000BSC |
| Model: | BPNet |
| A [ | -1.16e-04 | 0.00e+00 | 1.72e-02 | 8.75e-03 | 4.35e-02 | 2.70e-03 | 3.38e-02 | 9.80e-03 | 2.63e-04 | -6.65e-05 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 6.70e-02 | 6.65e-02 | -5.45e-04 | -4.95e-04 | -5.31e-05 | -6.74e-04 | -5.60e-05 | -8.39e-05 | 0.00e+00 | -2.54e-05 | ] |
| G [ | -3.28e-05 | 0.00e+00 | -1.19e-05 | -2.64e-04 | -2.42e-04 | -2.62e-04 | -2.35e-04 | -7.97e-04 | 7.48e-02 | 6.97e-02 | ] |
| T [ | -2.19e-04 | 7.49e-04 | 1.86e-03 | 1.47e-02 | 4.41e-04 | 3.29e-02 | 4.10e-04 | 5.16e-03 | -5.19e-06 | -4.64e-05 | ] |
