Detailed information of deep learning profile BP000902.1

This page shows detailed deep learning-derived predictions and motifs for HNF1A in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: HNF1A
Model ID: BP000902.1
Cell line/tissue: HepG2
Class: Homeo domain factors
Family: POU domain factors
Best Match(es): MA0046.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P20823  
Source: ENCSR633HRJ
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.76e-05 -2.04e-03 -2.36e-03 8.21e-02 5.26e-02 1.84e-03 -2.15e-03 6.38e-02 -1.73e-04 -1.12e-04 5.26e-02 6.28e-02 -7.29e-04 -3.56e-03 ]
C [ -1.39e-03 -9.37e-04 -1.54e-04 -1.49e-04 -1.25e-03 -4.85e-04 8.56e-03 -5.06e-05 -7.05e-05 -1.31e-05 -6.27e-04 -3.26e-04 6.29e-02 1.15e-02 ]
G [ 3.99e-02 -8.54e-04 -2.19e-03 4.35e-04 -4.75e-04 -8.56e-04 2.94e-03 7.12e-06 -3.86e-04 -2.49e-05 -1.36e-04 -4.47e-04 -3.57e-04 -3.13e-04 ]
T [ -2.35e-03 4.52e-02 3.90e-02 -6.59e-04 -1.23e-03 3.48e-02 -1.50e-04 3.35e-04 7.26e-02 9.46e-02 -1.79e-03 -5.70e-04 -1.23e-04 5.70e-03 ]

Frequency matrix

A [ 1812 662 1431 8606 7415 2699 1619 7472 372 70 7611 8227 594 1957 ]
C [ 411 924 975 33 1089 449 3157 76 47 167 260 368 7882 3366 ]
G [ 5849 915 648 576 176 146 2474 368 526 15 569 588 168 425 ]
T [ 1353 6924 6370 210 745 6131 2175 1509 8480 9173 985 242 781 3677 ]

1 profiles found for the same TF (HNF1A) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000306.1 HNF1A ENCSR800QIT HepG2 Homo sapiens
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