Detailed information of deep learning profile BP000902.1

This page shows detailed deep learning-derived predictions and motifs for HNF1A in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: HNF1A
Model ID: BP000902.1
Cell line/tissue: HepG2
Class: Homeo domain factors
Family: POU domain factors
Best Match(es): MA0046.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P20823  
Source: ENCSR633HRJ
Model: BPNet

Contribution weight matrix (CWM)

A [ 5.70e-03 -1.23e-04 -5.70e-04 -1.79e-03 9.46e-02 7.26e-02 3.35e-04 -1.50e-04 3.48e-02 -1.23e-03 -6.59e-04 3.90e-02 4.52e-02 -2.35e-03 ]
C [ -3.13e-04 -3.57e-04 -4.47e-04 -1.36e-04 -2.49e-05 -3.86e-04 7.12e-06 2.94e-03 -8.56e-04 -4.75e-04 4.35e-04 -2.19e-03 -8.54e-04 3.99e-02 ]
G [ 1.15e-02 6.29e-02 -3.26e-04 -6.27e-04 -1.31e-05 -7.05e-05 -5.06e-05 8.56e-03 -4.85e-04 -1.25e-03 -1.49e-04 -1.54e-04 -9.37e-04 -1.39e-03 ]
T [ -3.56e-03 -7.29e-04 6.28e-02 5.26e-02 -1.12e-04 -1.73e-04 6.38e-02 -2.15e-03 1.84e-03 5.26e-02 8.21e-02 -2.36e-03 -2.04e-03 2.76e-05 ]

Frequency matrix

A [ 3677 781 242 985 9173 8480 1509 2175 6131 745 210 6370 6924 1353 ]
C [ 425 168 588 569 15 526 368 2474 146 176 576 648 915 5849 ]
G [ 3366 7882 368 260 167 47 76 3157 449 1089 33 975 924 411 ]
T [ 1957 594 8227 7611 70 372 7472 1619 2699 7415 8606 1431 662 1812 ]

1 profiles found for the same TF (HNF1A) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000306.1 HNF1A ENCSR800QIT HepG2 Homo sapiens
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