This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000904.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR378BVM |
| Model: | BPNet |
| A [ | -1.46e-03 | -4.11e-03 | -3.62e-03 | -6.46e-04 | -6.24e-04 | 7.52e-03 | -5.50e-04 | -3.53e-04 | -2.61e-03 | 2.21e-02 | -2.52e-03 | -7.07e-03 | -8.65e-04 | -3.63e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.39e-02 | 6.14e-02 | -6.59e-04 | 1.28e-01 | 1.88e-01 | 6.31e-02 | 7.72e-02 | 1.96e-01 | 8.02e-04 | -2.19e-03 | 1.36e-02 | 8.71e-03 | -3.88e-04 | -2.26e-03 | ] |
| G [ | 3.54e-02 | -6.72e-04 | 1.06e-01 | 3.04e-04 | -4.55e-06 | 2.03e-04 | -9.87e-05 | -1.09e-05 | -7.73e-05 | 1.79e-02 | 6.73e-02 | -2.44e-04 | 1.89e-01 | 9.79e-02 | ] |
| T [ | -3.41e-03 | 1.01e-02 | -3.97e-03 | -1.65e-03 | -9.35e-04 | -4.74e-03 | 1.86e-02 | -4.04e-04 | 7.86e-02 | -6.20e-03 | -2.29e-03 | 2.70e-02 | -1.10e-03 | -1.74e-03 | ] |
| A [ | 4380 | 2281 | 3542 | 3515 | 306 | 15162 | 470 | 204 | 2804 | 15773 | 1377 | 5752 | 21 | 2884 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 13432 | 20376 | 1466 | 35962 | 41473 | 22976 | 24440 | 41657 | 3694 | 3612 | 14534 | 6089 | 12 | 2804 | ] |
| G [ | 20345 | 2314 | 31340 | 1804 | 108 | 1846 | 570 | 93 | 1578 | 16228 | 24057 | 1867 | 42230 | 32633 | ] |
| T [ | 4230 | 17416 | 6039 | 1106 | 500 | 2404 | 16907 | 433 | 34311 | 6774 | 2420 | 28679 | 124 | 4066 | ] |
