This page shows detailed deep learning-derived predictions and motifs for SRF in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | SRF |
| Model ID: | BP000905.1 |
| Cell line/tissue: | GM12878 |
| Class: | MADS box factors |
| Family: | Responders to external signals (SRF/RLM1) |
| Best Match(es): | MA0083.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P11831 |
| Source: | ENCSR041XML |
| Model: | BPNet |
| A [ | -2.76e-04 | -1.98e-05 | 1.75e-02 | 9.89e-03 | 4.51e-02 | 4.17e-03 | 3.36e-02 | 9.39e-03 | 6.21e-04 | -9.75e-05 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 5.44e-02 | 5.83e-02 | -3.78e-04 | -6.55e-04 | -9.80e-05 | -1.57e-03 | -2.38e-04 | -1.35e-04 | -1.57e-06 | -6.47e-05 | ] |
| G [ | -1.75e-04 | 6.26e-06 | -1.25e-04 | -8.68e-04 | -3.91e-04 | -1.61e-03 | -2.85e-04 | -9.78e-04 | 6.86e-02 | 6.20e-02 | ] |
| T [ | -5.70e-04 | 1.67e-03 | 2.18e-03 | 1.40e-02 | 2.11e-04 | 2.50e-02 | 8.91e-04 | 6.59e-03 | -1.33e-06 | -1.43e-04 | ] |
