Detailed information of deep learning profile BP000906.1

This page shows detailed deep learning-derived predictions and motifs for FOXA2 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOXA2
Model ID: BP000906.1
Cell line/tissue: HepG2
Class: Fork head/winged helix factors
Family: FOX
Best Match(es): MA0047.3 MA0032.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9Y261  
Source: ENCSR000BNI
Model: BPNet

Contribution weight matrix (CWM)

A [ -2.82e-04 1.39e-02 -7.19e-06 -4.95e-05 -2.44e-05 8.57e-02 1.03e-04 1.40e-02 -1.13e-03 1.61e-02 ]
C [ -4.28e-05 -2.67e-05 -9.42e-06 -6.97e-06 9.54e-06 -4.17e-07 5.69e-02 -7.59e-04 7.20e-03 -7.44e-04 ]
G [ -8.43e-05 6.05e-02 3.74e-06 1.48e-03 7.57e-03 3.50e-05 -5.18e-05 -2.25e-04 -1.19e-03 -6.36e-04 ]
T [ 6.52e-02 0.00e+00 9.46e-02 6.63e-02 5.73e-02 -2.72e-05 1.03e-03 5.83e-03 1.22e-02 5.83e-03 ]

Frequency matrix

A [ 5636 24046 549 787 1584 86420 7118 33189 12785 37050 ]
C [ 2240 1008 699 269 281 65 63892 18053 23789 7085 ]
G [ 2043 62379 248 9761 20523 866 1995 2713 13310 10271 ]
T [ 77953 439 86377 77056 65485 522 14868 33918 37989 33467 ]

5 profiles found for the same TF (FOXA2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000298.1 FOXA2 ENCSR066EBK HepG2 Homo sapiens
BP000704.1 FOXA2 ENCSR310NYI liver Homo sapiens
BP000787.1 FOXA2 ENCSR080XEY liver Homo sapiens
BP001055.1 FOXA2 ENCSR490AMH HepG2 Homo sapiens
BP001115.1 FOXA2 ENCSR000BRE A549 Homo sapiens
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