Detailed information of deep learning profile BP000908.1

This page shows detailed deep learning-derived predictions and motifs for IRF2 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: IRF2
Model ID: BP000908.1
Cell line/tissue: HepG2
Class: Tryptophan cluster factors
Family: Interferon-regulatory factors
Best Match(es): MA0051.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P14316  
Source: ENCSR604UJV
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.79e-02 -2.00e-04 -2.61e-05 0.00e+00 -1.58e-05 -2.89e-05 2.33e-02 -2.53e-04 -1.31e-05 -3.22e-06 -3.94e-05 -1.54e-04 2.75e-03 -6.54e-04 -9.02e-04 -4.77e-04 ]
C [ 8.06e-05 2.28e-02 2.18e-06 1.28e-05 9.83e-05 5.24e-02 1.59e-05 2.34e-02 3.87e-05 -7.32e-05 3.61e-04 3.30e-02 3.76e-04 6.76e-03 8.24e-04 4.87e-04 ]
G [ 3.80e-03 8.79e-03 2.33e-04 6.21e-05 8.82e-05 3.40e-05 8.29e-03 3.45e-03 0.00e+00 0.00e+00 3.14e-05 3.92e-04 6.83e-03 3.67e-03 1.92e-04 2.68e-04 ]
T [ -1.09e-03 7.83e-05 4.14e-02 5.73e-02 4.36e-02 5.58e-04 -9.56e-04 -5.96e-04 5.03e-02 5.34e-02 3.75e-02 -6.62e-04 -2.83e-03 -1.25e-03 1.49e-02 1.54e-02 ]

Frequency matrix

A [ 1469 95 13 0 17 53 1490 120 7 12 40 220 750 546 502 514 ]
C [ 269 1552 10 9 129 2441 237 1360 14 16 307 1731 761 945 581 550 ]
G [ 763 935 38 0 12 79 564 629 8 5 34 284 577 632 470 448 ]
T [ 316 235 2756 2808 2659 244 526 708 2788 2784 2436 582 729 694 1264 1305 ]

2 profiles found for the same TF (IRF2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000925.1 IRF2 ENCSR376WCJ K562 Homo sapiens
BP001230.1 IRF2 ENCSR645ZWR K562 Homo sapiens
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