This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000909.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR525VXD |
| Model: | BPNet |
| A [ | -1.52e-03 | -3.08e-03 | -3.15e-03 | -5.49e-04 | -4.25e-04 | 7.21e-03 | -4.26e-04 | -2.65e-04 | -2.27e-03 | 1.71e-02 | -1.79e-03 | -5.11e-03 | -4.69e-04 | -2.66e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.22e-02 | 5.50e-02 | -7.27e-04 | 1.11e-01 | 1.67e-01 | 5.07e-02 | 6.32e-02 | 1.70e-01 | 4.29e-04 | -1.99e-03 | 1.03e-02 | 6.57e-03 | -2.32e-04 | -1.82e-03 | ] |
| G [ | 3.18e-02 | -8.75e-04 | 9.35e-02 | 6.60e-05 | -1.34e-05 | 2.85e-04 | -7.34e-06 | -3.99e-05 | -1.62e-04 | 1.45e-02 | 6.23e-02 | -6.14e-04 | 1.68e-01 | 8.65e-02 | ] |
| T [ | -2.99e-03 | 9.08e-03 | -3.05e-03 | -1.26e-03 | -6.84e-04 | -3.26e-03 | 2.09e-02 | -3.56e-04 | 7.18e-02 | -5.43e-03 | -1.89e-03 | 2.70e-02 | -6.39e-04 | -1.77e-03 | ] |
| A [ | 3054 | 1484 | 2510 | 2680 | 160 | 11860 | 280 | 33 | 1726 | 11773 | 938 | 3934 | 0 | 2153 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 10077 | 15259 | 920 | 27219 | 31226 | 17260 | 17747 | 31612 | 2197 | 2477 | 10773 | 4143 | 1 | 1989 | ] |
| G [ | 15514 | 1417 | 24107 | 1091 | 39 | 1094 | 232 | 9 | 871 | 12439 | 18401 | 1190 | 31721 | 24538 | ] |
| T [ | 3079 | 13563 | 4187 | 734 | 299 | 1510 | 13465 | 70 | 26931 | 5035 | 1612 | 22457 | 2 | 3044 | ] |
