This page shows detailed deep learning-derived predictions and motifs for CTCF in endothelial cell of umbilical vein using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000912.1 |
| Cell line/tissue: | endothelial cell of umbilical vein |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000ALA |
| Model: | BPNet |
| A [ | -2.95e-03 | -1.23e-03 | 3.88e-02 | -2.69e-03 | -8.61e-03 | 1.13e-01 | -6.11e-04 | 2.09e-02 | -5.74e-03 | -1.44e-03 | -2.27e-03 | -5.75e-03 | 1.01e-02 | -4.66e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.41e-01 | 2.63e-01 | 8.08e-05 | 9.27e-02 | 2.54e-02 | -4.49e-04 | -1.01e-04 | -1.44e-04 | -3.87e-04 | -3.84e-05 | 1.33e-03 | 1.30e-01 | 3.65e-04 | 4.47e-02 | ] |
| G [ | -2.46e-03 | -4.89e-04 | 8.12e-03 | 1.83e-02 | -3.18e-03 | 1.55e-03 | 2.63e-01 | 1.10e-01 | 8.60e-02 | 2.52e-01 | 1.63e-01 | 2.43e-04 | 7.85e-02 | 1.64e-02 | ] |
| T [ | -4.41e-03 | -8.87e-04 | -8.06e-03 | -2.70e-03 | 2.86e-02 | -3.36e-03 | -3.11e-04 | -6.51e-04 | 6.07e-03 | -8.64e-04 | -1.08e-03 | -4.72e-03 | -4.59e-03 | -1.73e-03 | ] |
| A [ | 3325 | 653 | 25387 | 2075 | 5545 | 31732 | 224 | 13723 | 2195 | 587 | 1164 | 5434 | 14574 | 3887 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 29849 | 36450 | 1590 | 21758 | 15465 | 1042 | 37 | 306 | 1411 | 269 | 1856 | 27259 | 2442 | 18630 | ] |
| G [ | 2212 | 229 | 5498 | 12713 | 2894 | 2765 | 37205 | 23190 | 21781 | 36263 | 31604 | 1568 | 18481 | 11237 | ] |
| T [ | 2184 | 238 | 5095 | 1024 | 13667 | 2031 | 104 | 350 | 12184 | 451 | 2946 | 3309 | 2074 | 3816 | ] |
