This page shows detailed deep learning-derived predictions and motifs for CTCF in IMR-90 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000914.1 |
| Cell line/tissue: | IMR-90 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000EFI |
| Model: | BPNet |
| A [ | -6.37e-04 | -3.14e-03 | -2.95e-03 | -5.01e-04 | -5.12e-04 | 3.34e-03 | -5.96e-04 | -3.33e-04 | -1.80e-03 | 1.66e-02 | -1.82e-03 | -4.65e-03 | -7.47e-04 | -2.45e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.26e-03 | 4.58e-02 | -1.52e-04 | 9.10e-02 | 1.44e-01 | 4.91e-02 | 6.30e-02 | 1.53e-01 | 5.47e-04 | -1.95e-03 | 9.79e-03 | 5.30e-03 | -3.83e-04 | -1.55e-03 | ] |
| G [ | 2.73e-02 | 2.12e-04 | 7.17e-02 | 7.76e-04 | 2.57e-07 | -3.18e-04 | -1.67e-04 | -7.22e-05 | -3.41e-04 | 1.38e-02 | 4.71e-02 | 6.80e-05 | 1.50e-01 | 7.61e-02 | ] |
| T [ | -2.54e-03 | 5.84e-03 | -2.37e-03 | -1.67e-03 | -8.58e-04 | -4.28e-03 | 1.41e-02 | -3.19e-04 | 6.58e-02 | -4.29e-03 | -1.61e-03 | 2.11e-02 | -1.17e-03 | -1.83e-03 | ] |
| A [ | 5499 | 3121 | 4465 | 4093 | 231 | 16970 | 550 | 241 | 3394 | 17471 | 1876 | 7842 | 361 | 3558 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 15285 | 25108 | 2079 | 43306 | 50497 | 27808 | 31209 | 50494 | 4474 | 5050 | 18622 | 7892 | 325 | 3795 | ] |
| G [ | 25149 | 3264 | 36449 | 2265 | 120 | 2250 | 589 | 84 | 1780 | 20550 | 27282 | 2740 | 49454 | 38799 | ] |
| T [ | 5336 | 19776 | 8274 | 1604 | 420 | 4239 | 18920 | 449 | 41620 | 8197 | 3488 | 32794 | 1128 | 5116 | ] |
