This page shows detailed deep learning-derived predictions and motifs for CTCF in bipolar neuron using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000915.1 |
| Cell line/tissue: | bipolar neuron |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR619IUE |
| Model: | BPNet |
| A [ | -1.73e-03 | -1.57e-03 | 2.13e-02 | -1.26e-03 | -3.60e-03 | 5.93e-02 | -3.69e-04 | 1.46e-02 | -5.94e-03 | -6.33e-04 | -1.69e-03 | -4.16e-03 | 8.70e-03 | -2.94e-03 | -2.97e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7.04e-02 | 1.43e-01 | 6.46e-04 | 4.22e-02 | 1.36e-02 | -3.68e-04 | -1.35e-04 | -2.40e-04 | -3.09e-04 | -5.86e-05 | 3.36e-04 | 8.98e-02 | 3.90e-04 | 3.68e-02 | 1.38e-02 | ] |
| G [ | -1.94e-03 | -6.97e-04 | 6.39e-03 | 1.32e-02 | -1.83e-03 | 1.49e-03 | 1.65e-01 | 7.84e-02 | 5.25e-02 | 1.60e-01 | 1.09e-01 | -2.25e-04 | 5.88e-02 | 1.08e-02 | -1.41e-03 | ] |
| T [ | -2.48e-03 | -1.30e-03 | -5.17e-03 | -2.24e-03 | 1.50e-02 | -2.11e-03 | -4.07e-04 | -6.52e-04 | 6.52e-03 | -4.30e-04 | -5.02e-04 | -3.25e-03 | -3.64e-03 | -8.39e-04 | 1.43e-02 | ] |
| A [ | 7909 | 3091 | 41518 | 5602 | 11273 | 53874 | 960 | 24623 | 5531 | 1 | 1842 | 10782 | 25493 | 6628 | 9794 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 49929 | 63684 | 4981 | 35288 | 27124 | 2501 | 234 | 605 | 2776 | 0 | 3289 | 50414 | 4242 | 35975 | 24216 | ] |
| G [ | 6573 | 1768 | 11792 | 25879 | 7521 | 7713 | 67964 | 43766 | 38665 | 69706 | 58990 | 2849 | 36282 | 19859 | 7841 | ] |
| T [ | 5297 | 1165 | 11417 | 2939 | 23789 | 5620 | 550 | 714 | 22736 | 1 | 5587 | 5663 | 3691 | 7245 | 27858 | ] |
