This page shows detailed deep learning-derived predictions and motifs for CTCF in gastroesophageal sphincter using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000916.1 |
| Cell line/tissue: | gastroesophageal sphincter |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR186NVR |
| Model: | BPNet |
| A [ | -5.10e-04 | -1.99e-03 | -1.70e-03 | -4.72e-04 | -4.71e-04 | 2.58e-03 | -3.34e-04 | -2.11e-04 | -1.50e-03 | 1.44e-02 | -1.36e-03 | -4.00e-03 | -2.25e-04 | -2.14e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.92e-03 | 3.24e-02 | -4.34e-04 | 6.97e-02 | 1.13e-01 | 3.77e-02 | 4.98e-02 | 1.31e-01 | 4.80e-04 | -1.52e-03 | 1.08e-02 | 5.69e-03 | -1.22e-04 | -1.10e-03 | ] |
| G [ | 1.60e-02 | -3.75e-04 | 5.61e-02 | 1.00e-04 | -6.00e-05 | 1.40e-04 | -1.70e-05 | -3.66e-05 | -9.95e-05 | 1.25e-02 | 5.25e-02 | -4.30e-04 | 1.40e-01 | 7.46e-02 | ] |
| T [ | -1.82e-03 | 5.92e-03 | -1.91e-03 | -9.37e-04 | -6.36e-04 | -2.47e-03 | 1.03e-02 | -3.17e-04 | 5.65e-02 | -3.72e-03 | -1.30e-03 | 2.13e-02 | -3.27e-04 | -1.26e-03 | ] |
| A [ | 4290 | 2895 | 3673 | 3210 | 652 | 11861 | 587 | 25 | 2230 | 12597 | 1016 | 5334 | 0 | 2031 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 11969 | 17741 | 1990 | 30477 | 35935 | 20669 | 23611 | 37796 | 2847 | 3369 | 13193 | 5986 | 0 | 2226 | ] |
| G [ | 17103 | 3307 | 26163 | 2279 | 557 | 2447 | 602 | 7 | 1323 | 16352 | 21778 | 1684 | 37891 | 30429 | ] |
| T [ | 4530 | 13948 | 6064 | 1924 | 747 | 2914 | 13091 | 63 | 31491 | 5573 | 1905 | 24888 | 0 | 3205 | ] |
