This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000917.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR329KRE |
| Model: | BPNet |
| A [ | -1.30e-03 | -8.68e-04 | 2.70e-02 | -1.78e-03 | -5.31e-03 | 6.77e-02 | -3.66e-04 | 1.91e-02 | -4.12e-03 | -7.28e-04 | -1.45e-03 | -3.55e-03 | 1.17e-02 | -3.09e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.73e-02 | 1.72e-01 | -6.68e-04 | 5.73e-02 | 1.54e-02 | -8.08e-05 | -3.61e-05 | 5.91e-05 | 4.61e-04 | -9.49e-06 | 1.79e-04 | 9.68e-02 | -9.12e-04 | 3.32e-02 | ] |
| G [ | -1.81e-03 | -3.76e-04 | 7.67e-03 | 1.12e-02 | -1.80e-03 | 1.15e-03 | 1.71e-01 | 6.62e-02 | 5.08e-02 | 1.71e-01 | 1.16e-01 | -7.89e-04 | 5.45e-02 | 1.28e-02 | ] |
| T [ | -3.05e-03 | -5.57e-04 | -6.64e-03 | -2.08e-03 | 1.91e-02 | -2.45e-03 | -3.03e-04 | -4.90e-04 | 6.22e-03 | -4.88e-04 | -5.73e-04 | -3.16e-03 | -3.62e-03 | -1.52e-03 | ] |
| A [ | 4360 | 28 | 28987 | 2722 | 7046 | 34666 | 519 | 16822 | 2779 | 623 | 1311 | 6345 | 17827 | 4475 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 32911 | 43301 | 1956 | 24044 | 16293 | 1655 | 104 | 650 | 2317 | 207 | 2005 | 31623 | 2453 | 20366 | ] |
| G [ | 3048 | 2 | 6332 | 15027 | 4023 | 4071 | 42443 | 25328 | 23124 | 42039 | 36291 | 1639 | 20546 | 13859 | ] |
| T [ | 3019 | 6 | 6062 | 1544 | 15975 | 2944 | 271 | 538 | 15117 | 469 | 3730 | 3731 | 2511 | 4637 | ] |
