Detailed information of deep learning profile BP000919.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000919.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR908AOO
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.08e-02 5.23e-05 7.16e-03 6.71e-02 0.00e+00 3.52e-02 -5.93e-04 3.03e-03 3.01e-03 -2.09e-03 -1.03e-04 -6.18e-04 1.34e-03 -2.19e-04 -1.98e-03 ]
C [ -1.23e-04 1.79e-06 -1.55e-03 -1.02e-05 1.01e-01 -7.65e-05 8.51e-04 -7.34e-04 5.25e-03 3.18e-03 -1.89e-04 -5.76e-04 5.95e-05 4.04e-02 6.66e-03 ]
G [ 5.69e-03 6.68e-02 -2.83e-04 -2.80e-05 -2.22e-06 2.34e-03 1.55e-03 -8.83e-04 1.15e-03 -1.54e-03 8.51e-02 -5.10e-04 -1.70e-03 -2.85e-04 -9.85e-05 ]
T [ -1.52e-03 2.54e-05 2.35e-03 -5.46e-05 -7.40e-07 -4.30e-04 7.74e-03 4.01e-03 -1.02e-03 1.96e-02 -1.27e-06 5.12e-02 4.51e-03 -6.97e-04 6.01e-03 ]

Frequency matrix

A [ 38325 3572 33429 73851 1 61189 14062 24629 20677 19882 3523 11531 17682 15351 16063 ]
C [ 1648 136 9828 248 77698 1319 18132 15227 23049 6962 3893 7977 18318 41366 24327 ]
G [ 24133 71722 15681 749 8 4100 21330 14601 19767 7318 68963 6738 15083 4248 7424 ]
T [ 13613 2290 18783 2872 13 11112 24196 23263 14227 43558 1341 51475 26637 16755 29906 ]

18 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000215.1 NR3C1 ENCSR952GOL A549 Homo sapiens
BP000278.1 NR3C1 ENCSR471EKW A549 Homo sapiens
BP000289.1 NR3C1 ENCSR000BHG A549 Homo sapiens
BP000310.1 NR3C1 ENCSR255CTA A549 Homo sapiens
BP000332.1 NR3C1 ENCSR720DXT A549 Homo sapiens
BP000345.1 NR3C1 ENCSR385RUW A549 Homo sapiens
BP000513.1 NR3C1 ENCSR070VXO A549 Homo sapiens
BP000581.1 NR3C1 ENCSR691GRA A549 Homo sapiens
BP000659.1 NR3C1 ENCSR424JOE A549 Homo sapiens
BP000734.1 NR3C1 ENCSR686PFM A549 Homo sapiens
Showing 10 profiles of page 1 from 2 pages