This page shows detailed deep learning-derived predictions and motifs for CTCF in esophagus muscularis mucosa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000922.1 |
| Cell line/tissue: | esophagus muscularis mucosa |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR443WKD |
| Model: | BPNet |
| A [ | -1.54e-03 | -6.59e-04 | 3.03e-02 | -1.98e-03 | -5.43e-03 | 7.41e-02 | -3.41e-04 | 2.27e-02 | -3.35e-03 | -6.85e-04 | -1.30e-03 | -2.27e-03 | 9.62e-03 | -3.14e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.19e-02 | 1.76e-01 | -6.64e-04 | 6.35e-02 | 1.69e-02 | -1.12e-04 | -5.09e-05 | -1.73e-05 | -1.37e-04 | -7.83e-05 | -9.02e-05 | 9.44e-02 | -6.84e-04 | 3.23e-02 | ] |
| G [ | -1.90e-03 | -2.62e-04 | 7.23e-03 | 1.22e-02 | -1.97e-03 | 5.90e-04 | 1.78e-01 | 6.93e-02 | 5.36e-02 | 1.76e-01 | 1.18e-01 | -6.74e-04 | 5.88e-02 | 1.42e-02 | ] |
| T [ | -2.96e-03 | -5.48e-04 | -4.82e-03 | -1.72e-03 | 1.51e-02 | -2.32e-03 | -2.29e-04 | -4.79e-04 | 7.66e-03 | -4.17e-04 | -4.64e-04 | -3.43e-03 | -2.99e-03 | -1.52e-03 | ] |
| A [ | 3189 | 415 | 22783 | 1938 | 5323 | 28168 | 326 | 13041 | 2014 | 480 | 873 | 4808 | 13242 | 3265 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 26666 | 33612 | 1640 | 19696 | 13922 | 1384 | 89 | 377 | 1623 | 143 | 1187 | 25631 | 1567 | 17305 | ] |
| G [ | 2345 | 172 | 5503 | 11674 | 3175 | 2740 | 33723 | 20571 | 18760 | 33392 | 29584 | 1063 | 17941 | 10629 | ] |
| T [ | 2106 | 107 | 4381 | 999 | 11886 | 2014 | 168 | 317 | 11909 | 291 | 2661 | 2804 | 1556 | 3107 | ] |
