This page shows detailed deep learning-derived predictions and motifs for CTCF in neural progenitor cell using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000924.1 |
| Cell line/tissue: | neural progenitor cell |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR260FAS |
| Model: | BPNet |
| A [ | -2.13e-04 | -2.56e-03 | -2.41e-03 | -3.84e-04 | -5.97e-04 | 2.12e-03 | -4.50e-04 | -2.14e-04 | -1.71e-03 | 1.58e-02 | -1.71e-03 | -4.33e-03 | -6.11e-04 | -1.79e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 6.75e-03 | 3.53e-02 | 2.80e-04 | 7.41e-02 | 1.19e-01 | 4.85e-02 | 6.66e-02 | 1.37e-01 | 1.00e-03 | -1.53e-03 | 9.03e-03 | 3.93e-03 | -3.10e-04 | -1.37e-03 | ] |
| G [ | 1.99e-02 | 1.16e-03 | 5.67e-02 | 1.58e-03 | -6.74e-05 | -2.34e-04 | -1.12e-04 | -3.02e-05 | -2.04e-04 | 1.11e-02 | 4.56e-02 | 1.98e-05 | 1.35e-01 | 7.52e-02 | ] |
| T [ | -1.91e-03 | 5.13e-03 | -1.45e-03 | -1.46e-03 | -7.69e-04 | -3.53e-03 | 1.05e-02 | -2.63e-04 | 6.24e-02 | -2.89e-03 | -1.08e-03 | 2.12e-02 | -8.87e-04 | -9.50e-04 | ] |
| A [ | 6583 | 3922 | 5016 | 4525 | 751 | 16173 | 594 | 230 | 3259 | 19314 | 1766 | 8452 | 70 | 3089 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 15673 | 24745 | 3459 | 42389 | 51019 | 31024 | 34153 | 52305 | 4551 | 4401 | 18223 | 6962 | 81 | 3064 | ] |
| G [ | 24378 | 4897 | 35234 | 3806 | 524 | 2075 | 384 | 86 | 1509 | 21063 | 29737 | 2753 | 52607 | 42255 | ] |
| T [ | 6428 | 19498 | 9353 | 2343 | 768 | 3790 | 17931 | 441 | 43743 | 8284 | 3335 | 34895 | 304 | 4654 | ] |
