This page shows detailed deep learning-derived predictions and motifs for CTCF in GM23338 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000927.1 |
| Cell line/tissue: | GM23338 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR611HGB |
| Model: | BPNet |
| A [ | -2.49e-03 | -2.00e-03 | -9.59e-04 | -1.06e-03 | -1.51e-04 | -5.82e-04 | -1.50e-04 | -1.77e-03 | 1.97e-02 | -1.66e-03 | -5.01e-03 | -4.56e-04 | -1.80e-03 | -4.40e-03 | -3.16e-03 | 8.58e-03 | 1.44e-03 | 2.83e-03 | 6.25e-04 | -1.43e-03 | -1.86e-03 | -3.93e-04 | -6.15e-04 | 2.35e-03 | 2.54e-02 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 2.64e-02 | 1.70e-04 | 6.08e-02 | 1.10e-01 | 4.83e-02 | 7.98e-02 | 1.57e-01 | 1.43e-03 | -1.72e-03 | 1.07e-02 | 3.55e-03 | -1.89e-04 | -1.22e-03 | 1.48e-02 | 1.09e-02 | -1.67e-03 | 4.85e-04 | -5.33e-04 | -3.99e-04 | -9.85e-04 | -4.12e-04 | -1.14e-03 | -2.37e-03 | -1.76e-03 | -1.44e-03 | ] |
| G [ | 1.41e-03 | 4.37e-02 | 1.30e-03 | -2.89e-04 | -3.30e-04 | -8.17e-05 | -2.64e-05 | -3.20e-04 | 1.49e-02 | 5.87e-02 | 3.17e-05 | 1.55e-01 | 1.01e-01 | -2.13e-03 | 5.56e-03 | 1.28e-02 | 2.02e-03 | -1.48e-03 | 1.63e-04 | 3.23e-03 | 5.45e-03 | 1.25e-02 | 2.78e-02 | 1.40e-03 | -2.92e-03 | ] |
| T [ | 2.41e-03 | -8.76e-04 | -1.43e-03 | -1.37e-03 | -3.73e-03 | 4.79e-03 | -2.79e-04 | 7.17e-02 | -3.41e-03 | -1.16e-03 | 2.50e-02 | -6.55e-04 | -1.22e-03 | 6.70e-03 | -4.50e-03 | -4.44e-03 | -1.77e-03 | 7.22e-04 | 5.67e-04 | 4.36e-04 | -3.04e-04 | -2.26e-03 | -1.99e-03 | 2.71e-03 | -2.62e-04 | ] |
| A [ | 4195 | 5044 | 4217 | 1926 | 12145 | 537 | 13 | 1898 | 16408 | 1015 | 6366 | 90 | 1619 | 7575 | 9383 | 17487 | 11581 | 13519 | 11672 | 9671 | 9217 | 11133 | 9901 | 13036 | 20433 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 17814 | 3338 | 31008 | 37600 | 24699 | 29461 | 41919 | 2567 | 2342 | 13114 | 4572 | 56 | 1333 | 17476 | 14860 | 4989 | 10213 | 8102 | 8654 | 9317 | 8772 | 6330 | 5335 | 8824 | 8382 | ] |
| G [ | 4963 | 25413 | 3248 | 1244 | 1668 | 160 | 3 | 707 | 17443 | 25511 | 1639 | 41437 | 36174 | 4003 | 9362 | 14125 | 10915 | 9194 | 10688 | 12002 | 13414 | 15869 | 19813 | 10074 | 5918 | ] |
| T [ | 15006 | 8182 | 3505 | 1209 | 3467 | 11819 | 43 | 36806 | 5785 | 2338 | 29401 | 395 | 2851 | 12925 | 8373 | 5376 | 9270 | 11162 | 10965 | 10988 | 10575 | 8647 | 6929 | 10044 | 7245 | ] |
