This page shows detailed deep learning-derived predictions and motifs for CTCF in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000928.1 |
| Cell line/tissue: | A549 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR035OXA |
| Model: | BPNet |
| A [ | -1.32e-03 | -3.34e-03 | -2.73e-03 | -9.44e-05 | -4.30e-04 | 7.43e-03 | -4.47e-04 | -2.32e-04 | -2.05e-03 | 1.61e-02 | -1.81e-03 | -4.35e-03 | -7.57e-04 | -2.20e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.02e-02 | 5.19e-02 | -9.63e-04 | 9.96e-02 | 1.42e-01 | 4.80e-02 | 5.97e-02 | 1.55e-01 | 5.15e-04 | -1.60e-03 | 1.04e-02 | 4.89e-03 | -3.53e-04 | -1.64e-03 | ] |
| G [ | 3.15e-02 | -5.17e-04 | 8.72e-02 | -1.77e-04 | -5.39e-05 | -3.03e-04 | -1.81e-04 | -8.72e-05 | -2.80e-04 | 1.16e-02 | 4.83e-02 | -1.97e-04 | 1.41e-01 | 6.90e-02 | ] |
| T [ | -2.70e-03 | 8.29e-03 | -3.60e-03 | -1.24e-03 | -7.04e-04 | -3.96e-03 | 1.55e-02 | -3.47e-04 | 6.41e-02 | -4.46e-03 | -1.85e-03 | 2.04e-02 | -9.73e-04 | -1.66e-03 | ] |
| A [ | 3435 | 1757 | 2707 | 2726 | 114 | 14487 | 283 | 154 | 2251 | 13702 | 1264 | 5461 | 104 | 2889 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 11591 | 19331 | 722 | 34708 | 38244 | 20712 | 22145 | 38087 | 2985 | 3357 | 13889 | 5150 | 125 | 2695 | ] |
| G [ | 20050 | 1320 | 30445 | 632 | 34 | 1266 | 259 | 87 | 1083 | 15400 | 20933 | 1871 | 38050 | 29013 | ] |
| T [ | 3551 | 16219 | 4753 | 561 | 235 | 2161 | 15939 | 299 | 32308 | 6167 | 2541 | 26145 | 348 | 4030 | ] |
