Detailed information of deep learning profile BP000931.1

This page shows detailed deep learning-derived predictions and motifs for CREM in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CREM
Model ID: BP000931.1
Cell line/tissue: GM12878
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
Best Match(es): MA0609.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P27699  
Source: ENCSR839XZU
Model: BPNet

Contribution weight matrix (CWM)

A [ 4.87e-05 -7.12e-04 2.44e-02 -2.46e-06 -7.51e-06 8.24e-06 2.51e-04 4.48e-02 -2.11e-04 ]
C [ 5.15e-04 8.45e-04 -2.36e-04 5.92e-02 0.00e+00 7.21e-05 3.92e-02 -5.31e-06 7.26e-03 ]
G [ -5.65e-04 9.14e-03 5.01e-03 0.00e+00 6.51e-02 -6.01e-06 1.76e-05 3.32e-04 -3.68e-04 ]
T [ 1.37e-02 4.81e-03 -1.94e-04 1.33e-06 0.00e+00 5.17e-02 -1.87e-05 -1.91e-05 5.61e-03 ]

Frequency matrix

A [ 10776 8576 18474 2495 675 2504 6795 36990 5261 ]
C [ 12373 10752 6878 38837 35 3814 32680 1247 17283 ]
G [ 8128 13579 14646 514 44863 1318 4063 5328 10566 ]
T [ 14309 12678 5587 3739 12 37949 2047 2020 12475 ]

Alternative motif patterns (AMPs)

1 profiles found for the same TF (CREM) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000978.1 CREM ENCSR077DKV K562 Homo sapiens
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