This page shows detailed deep learning-derived predictions and motifs for CTCF in GM12874 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000936.1 |
| Cell line/tissue: | GM12874 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DRR |
| Model: | BPNet |
| A [ | -1.13e-03 | -3.91e-03 | -4.06e-03 | -1.26e-03 | -9.31e-04 | 4.14e-03 | -8.33e-04 | -4.35e-04 | -2.89e-03 | 2.44e-02 | -2.46e-03 | -6.97e-03 | -8.49e-04 | -3.76e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.14e-02 | 6.09e-02 | 8.34e-04 | 1.20e-01 | 1.98e-01 | 7.10e-02 | 9.09e-02 | 2.12e-01 | 1.55e-03 | -2.83e-03 | 1.37e-02 | 5.99e-03 | -4.41e-04 | -1.94e-03 | ] |
| G [ | 3.61e-02 | 1.18e-03 | 9.71e-02 | 2.33e-03 | -1.19e-04 | -3.48e-04 | -1.89e-04 | -1.16e-04 | -4.50e-04 | 1.68e-02 | 7.18e-02 | 5.11e-04 | 2.10e-01 | 1.15e-01 | ] |
| T [ | -3.72e-03 | 4.92e-03 | -4.50e-03 | -2.61e-03 | -1.11e-03 | -5.44e-03 | 1.25e-02 | -4.63e-04 | 8.35e-02 | -6.29e-03 | -2.34e-03 | 2.48e-02 | -1.21e-03 | -2.38e-03 | ] |
| A [ | 5697 | 3198 | 4725 | 4204 | 776 | 15062 | 785 | 268 | 3579 | 17664 | 1649 | 7912 | 25 | 2907 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 13889 | 24565 | 2908 | 39584 | 47425 | 28746 | 31919 | 48644 | 4897 | 4770 | 17289 | 7199 | 32 | 3291 | ] |
| G [ | 24587 | 4503 | 34294 | 3627 | 518 | 2369 | 623 | 154 | 1909 | 19756 | 27566 | 3046 | 49308 | 39088 | ] |
| T [ | 5343 | 17251 | 7588 | 2101 | 797 | 3339 | 16189 | 450 | 39130 | 7327 | 3012 | 31359 | 151 | 4230 | ] |
