This page shows detailed deep learning-derived predictions and motifs for CTCF in transverse colon using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000937.1 |
| Cell line/tissue: | transverse colon |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR608WPS |
| Model: | BPNet |
| A [ | -1.60e-03 | -5.04e-04 | 2.72e-02 | -1.36e-03 | -4.48e-03 | 7.50e-02 | -3.81e-04 | 1.54e-02 | -3.32e-03 | -8.28e-04 | -1.35e-03 | -2.34e-03 | 8.61e-03 | -2.24e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.36e-02 | 1.59e-01 | -7.16e-04 | 5.38e-02 | 1.42e-02 | -3.24e-04 | -6.89e-05 | -1.36e-04 | -3.20e-04 | -1.03e-04 | 4.63e-04 | 7.30e-02 | -2.06e-04 | 2.61e-02 | ] |
| G [ | -1.77e-03 | -2.40e-04 | 5.52e-03 | 1.02e-02 | -1.94e-03 | 1.63e-04 | 1.59e-01 | 6.29e-02 | 4.58e-02 | 1.47e-01 | 9.25e-02 | -2.60e-04 | 4.45e-02 | 8.10e-03 | ] |
| T [ | -2.53e-03 | -4.19e-04 | -4.69e-03 | -1.60e-03 | 1.77e-02 | -1.66e-03 | -2.03e-04 | -4.25e-04 | 6.31e-03 | -5.31e-04 | -3.76e-04 | -2.63e-03 | -2.76e-03 | -9.58e-04 | ] |
| A [ | 3471 | 3 | 27756 | 2091 | 6040 | 34467 | 218 | 15164 | 2589 | 774 | 1544 | 6371 | 15962 | 4485 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 32859 | 40860 | 1529 | 23718 | 16800 | 1184 | 65 | 404 | 1889 | 418 | 2335 | 28656 | 2866 | 19387 | ] |
| G [ | 2190 | 0 | 5882 | 13934 | 3290 | 3021 | 40448 | 24801 | 22568 | 39033 | 33525 | 2070 | 19543 | 12582 | ] |
| T [ | 2344 | 1 | 5697 | 1121 | 14734 | 2192 | 133 | 495 | 13818 | 639 | 3460 | 3767 | 2494 | 4410 | ] |
