This page shows detailed deep learning-derived predictions and motifs for CTCF in mammary epithelial cell using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000940.1 |
| Cell line/tissue: | mammary epithelial cell |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000ALV |
| Model: | BPNet |
| A [ | -1.45e-03 | -3.43e-03 | -2.84e-03 | -9.33e-04 | -3.60e-04 | 3.98e-03 | -5.63e-04 | -3.05e-04 | -2.45e-03 | 2.14e-02 | -2.34e-03 | -6.23e-03 | -5.43e-04 | -3.20e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.32e-02 | 6.13e-02 | -1.31e-03 | 1.21e-01 | 1.82e-01 | 5.35e-02 | 8.05e-02 | 1.98e-01 | 7.53e-04 | -2.43e-03 | 1.64e-02 | 6.19e-03 | -3.28e-04 | -1.90e-03 | ] |
| G [ | 3.40e-02 | -9.34e-04 | 9.66e-02 | -5.78e-04 | -3.82e-05 | -3.93e-04 | -2.17e-04 | -8.84e-05 | -3.54e-04 | 1.77e-02 | 6.17e-02 | -9.88e-05 | 1.95e-01 | 1.03e-01 | ] |
| T [ | -3.40e-03 | 9.74e-03 | -3.41e-03 | -1.23e-03 | -7.30e-04 | -4.83e-03 | 1.55e-02 | -4.15e-04 | 8.50e-02 | -5.57e-03 | -1.95e-03 | 2.72e-02 | -8.25e-04 | -2.47e-03 | ] |
| A [ | 3861 | 2052 | 3497 | 3008 | 90 | 14707 | 381 | 188 | 2310 | 14447 | 1291 | 5858 | 5 | 2598 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 11967 | 18556 | 1138 | 34091 | 38829 | 20609 | 22862 | 38538 | 3051 | 3053 | 13898 | 4084 | 2 | 2388 | ] |
| G [ | 19148 | 1892 | 28667 | 1129 | 13 | 1197 | 232 | 57 | 963 | 15364 | 21453 | 1733 | 39107 | 30339 | ] |
| T [ | 4142 | 16618 | 5816 | 890 | 186 | 2605 | 15643 | 335 | 32794 | 6254 | 2476 | 27443 | 4 | 3792 | ] |
