This page shows detailed deep learning-derived predictions and motifs for CTCF in progenitor cell of endocrine pancreas using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000941.1 |
| Cell line/tissue: | progenitor cell of endocrine pancreas |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR901NIN |
| Model: | BPNet |
| A [ | -2.00e-03 | -1.54e-03 | 2.76e-02 | -1.96e-03 | -5.17e-03 | 9.30e-02 | -4.10e-04 | 1.18e-02 | -6.48e-03 | -1.47e-03 | -2.65e-03 | -2.54e-03 | 6.17e-03 | -2.92e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.17e-01 | 2.02e-01 | 5.86e-04 | 7.14e-02 | 2.01e-02 | -4.35e-04 | -7.57e-05 | -1.57e-04 | -3.13e-04 | -1.21e-04 | 3.56e-03 | 8.36e-02 | 2.14e-03 | 3.21e-02 | ] |
| G [ | -1.71e-03 | -5.88e-04 | 7.00e-03 | 1.49e-02 | -2.67e-03 | 1.97e-03 | 2.09e-01 | 1.02e-01 | 7.44e-02 | 1.80e-01 | 1.09e-01 | 9.01e-04 | 5.18e-02 | 9.62e-03 | ] |
| T [ | -3.20e-03 | -9.38e-04 | -8.19e-03 | -2.50e-03 | 2.53e-02 | -2.84e-03 | -4.05e-04 | -7.15e-04 | 3.72e-03 | -1.19e-03 | -8.93e-04 | -3.94e-03 | -4.14e-03 | -8.00e-04 | ] |
| A [ | 5045 | 1039 | 36216 | 3472 | 8701 | 47176 | 378 | 19088 | 4307 | 510 | 2250 | 9807 | 20742 | 6878 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 45607 | 56060 | 3198 | 32878 | 23354 | 1847 | 95 | 565 | 2520 | 210 | 4245 | 39313 | 5436 | 26905 | ] |
| G [ | 3716 | 329 | 9033 | 19654 | 5003 | 5100 | 57078 | 37359 | 33270 | 56576 | 46291 | 3194 | 27370 | 17006 | ] |
| T [ | 3393 | 333 | 9315 | 1757 | 20703 | 3638 | 210 | 749 | 17664 | 465 | 4975 | 5446 | 4213 | 6973 | ] |
