This page shows detailed deep learning-derived predictions and motifs for CTCF in brain using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000945.1 |
| Cell line/tissue: | brain |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR423MQG |
| Model: | BPNet |
| A [ | -1.69e-03 | -4.23e-03 | -3.59e-03 | -5.44e-04 | -6.58e-04 | 6.34e-03 | -6.18e-04 | -3.12e-04 | -2.50e-03 | 2.02e-02 | -2.32e-03 | -6.27e-03 | -7.29e-04 | -2.93e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.45e-02 | 6.34e-02 | -3.83e-04 | 1.34e-01 | 1.98e-01 | 6.25e-02 | 8.28e-02 | 1.98e-01 | 4.67e-04 | -2.27e-03 | 1.25e-02 | 7.09e-03 | -4.45e-04 | -2.06e-03 | ] |
| G [ | 3.70e-02 | -2.92e-04 | 1.04e-01 | 4.04e-04 | -1.12e-04 | -7.50e-05 | -2.11e-04 | -6.01e-05 | -2.59e-04 | 1.80e-02 | 6.64e-02 | -2.55e-04 | 1.89e-01 | 9.80e-02 | ] |
| T [ | -3.36e-03 | 1.17e-02 | -4.30e-03 | -1.74e-03 | -8.54e-04 | -4.46e-03 | 2.21e-02 | -3.40e-04 | 8.14e-02 | -5.57e-03 | -2.07e-03 | 2.79e-02 | -1.28e-03 | -2.05e-03 | ] |
| A [ | 3471 | 2031 | 2581 | 2949 | 159 | 12509 | 212 | 34 | 1891 | 12855 | 1115 | 4466 | 10 | 2320 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 11359 | 14065 | 1068 | 28919 | 33410 | 18760 | 19720 | 33791 | 2287 | 2516 | 11887 | 3738 | 11 | 2024 | ] |
| G [ | 15539 | 1923 | 25862 | 1195 | 40 | 893 | 116 | 4 | 769 | 12988 | 19006 | 1265 | 33846 | 26206 | ] |
| T [ | 3537 | 15887 | 4396 | 844 | 297 | 1744 | 13858 | 77 | 28959 | 5546 | 1898 | 24438 | 39 | 3356 | ] |
