This page shows detailed deep learning-derived predictions and motifs for CTCF in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000947.1 |
| Cell line/tissue: | HCT116 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR048RGR |
| Model: | BPNet |
| A [ | -3.02e-03 | -2.57e-03 | -1.12e-03 | -1.06e-03 | 2.43e-03 | -8.28e-04 | -4.25e-04 | -1.84e-03 | 2.65e-02 | -1.96e-03 | -5.69e-03 | -8.95e-04 | -2.37e-03 | -4.54e-03 | -1.94e-03 | 1.05e-02 | 1.46e-03 | 4.69e-03 | 1.43e-03 | -7.43e-04 | -1.31e-03 | 4.76e-04 | -2.64e-04 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 3.64e-02 | 2.98e-04 | 8.48e-02 | 1.44e-01 | 5.84e-02 | 9.44e-02 | 1.84e-01 | 1.62e-03 | -2.13e-03 | 1.32e-02 | 4.16e-03 | -4.01e-04 | -1.95e-03 | 1.57e-02 | 9.78e-03 | -2.23e-03 | 5.48e-04 | -1.18e-03 | 1.47e-05 | -9.65e-04 | -4.52e-04 | -1.58e-03 | -3.25e-03 | ] |
| G [ | 1.29e-03 | 5.57e-02 | 2.08e-03 | -2.77e-04 | -3.58e-04 | -2.36e-04 | -8.63e-05 | -3.60e-04 | 1.65e-02 | 6.14e-02 | 2.88e-04 | 1.83e-01 | 1.14e-01 | -2.85e-03 | 7.01e-03 | 1.55e-02 | 3.72e-03 | -6.23e-04 | 8.94e-04 | 4.11e-03 | 7.51e-03 | 1.29e-02 | 3.05e-02 | ] |
| T [ | 5.43e-03 | -8.25e-04 | -2.00e-03 | -1.50e-03 | -5.11e-03 | 7.82e-03 | -3.18e-04 | 8.18e-02 | -3.66e-03 | -1.48e-03 | 3.23e-02 | -1.21e-03 | -1.20e-03 | 7.94e-03 | -4.92e-03 | -4.79e-03 | -1.34e-03 | 8.34e-04 | 3.09e-04 | 8.59e-04 | -9.27e-04 | -2.07e-03 | -2.41e-03 | ] |
| A [ | 5448 | 6706 | 5762 | 1668 | 16811 | 788 | 10 | 3251 | 22189 | 1626 | 9812 | 0 | 2125 | 10627 | 12905 | 22504 | 15147 | 17877 | 15172 | 12921 | 12603 | 14957 | 13687 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 22984 | 4665 | 41182 | 52264 | 32962 | 38112 | 56152 | 4597 | 3619 | 19179 | 4563 | 0 | 1752 | 23051 | 19073 | 7094 | 13631 | 10997 | 11949 | 12680 | 11821 | 9139 | 8000 | ] |
| G [ | 7163 | 33616 | 5326 | 1041 | 1727 | 237 | 3 | 1064 | 21942 | 32377 | 1920 | 56203 | 48297 | 6047 | 12391 | 18895 | 14969 | 12485 | 14555 | 15850 | 17756 | 20075 | 24411 | ] |
| T [ | 20610 | 11217 | 3934 | 1230 | 4704 | 17067 | 39 | 47291 | 8453 | 3022 | 39909 | 1 | 4030 | 16479 | 11835 | 7712 | 12458 | 14845 | 14528 | 14753 | 14024 | 12034 | 10106 | ] |
