This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000949.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR230RQK |
| Model: | BPNet |
| A [ | -1.85e-03 | -6.86e-04 | 2.94e-02 | -1.63e-03 | -5.23e-03 | 7.56e-02 | -4.19e-04 | 2.21e-02 | -3.04e-03 | -5.76e-04 | -1.13e-03 | -3.23e-03 | 8.98e-03 | -3.29e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.66e-02 | 1.70e-01 | -8.56e-04 | 6.24e-02 | 1.36e-02 | -1.65e-04 | -3.04e-05 | 3.12e-06 | 4.52e-05 | -1.10e-06 | -1.59e-04 | 1.02e-01 | -8.46e-04 | 3.52e-02 | ] |
| G [ | -1.53e-03 | -1.99e-04 | 7.25e-03 | 1.13e-02 | -1.71e-03 | 4.94e-04 | 1.74e-01 | 6.37e-02 | 5.18e-02 | 1.72e-01 | 1.18e-01 | -8.69e-04 | 5.92e-02 | 1.53e-02 | ] |
| T [ | -2.61e-03 | -5.53e-04 | -4.79e-03 | -1.81e-03 | 1.82e-02 | -2.25e-03 | -2.69e-04 | -3.13e-04 | 9.33e-03 | -3.10e-04 | -5.41e-04 | -3.42e-03 | -3.27e-03 | -1.91e-03 | ] |
| A [ | 3036 | 372 | 21698 | 1727 | 4853 | 26567 | 10 | 13478 | 1309 | 296 | 610 | 3961 | 13478 | 2915 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 23582 | 30074 | 1132 | 17594 | 11892 | 755 | 1 | 208 | 883 | 44 | 826 | 23557 | 1082 | 15222 | ] |
| G [ | 1880 | 88 | 4215 | 10369 | 2320 | 1856 | 30657 | 16758 | 16599 | 30160 | 26684 | 768 | 14721 | 9749 | ] |
| T [ | 2173 | 137 | 3626 | 981 | 11607 | 1493 | 3 | 227 | 11880 | 171 | 2551 | 2385 | 1391 | 2785 | ] |
