Detailed information of deep learning profile BP000950.1

This page shows detailed deep learning-derived predictions and motifs for NR2F1 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR2F1
Model ID: BP000950.1
Cell line/tissue: GM12878
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Best Match(es): MA0017.2 MA1537.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P10589  
Source: ENCSR514VYD
Model: BPNet

Contribution weight matrix (CWM)

A [ 3.30e-03 1.40e-02 -7.10e-06 -4.28e-06 -4.57e-07 6.19e-07 3.15e-02 1.92e-03 1.85e-03 1.05e-03 -3.06e-04 ]
C [ -1.43e-04 9.50e-07 6.94e-07 0.00e+00 -8.78e-06 3.21e-02 -9.47e-06 1.51e-03 6.72e-04 1.03e-03 1.70e-03 ]
G [ 4.26e-03 4.52e-03 3.79e-02 4.12e-02 7.01e-06 1.40e-05 1.53e-04 -1.19e-03 1.72e-03 3.32e-03 6.01e-03 ]
T [ -4.12e-04 1.76e-06 -9.11e-06 -1.14e-05 3.44e-02 5.64e-05 -2.18e-05 -1.30e-04 -1.76e-04 -8.87e-05 -4.08e-05 ]

Frequency matrix

A [ 39627 72021 4756 924 42 282 109648 31020 35320 31990 26117 ]
C [ 16086 3604 971 107 7048 99662 917 30217 22018 23276 27766 ]
G [ 47484 35581 104539 109850 9266 7913 5036 37441 39133 38784 39419 ]
T [ 14229 6222 7161 6547 101071 9569 1826 18749 20957 23376 24125 ]

3 profiles found for the same TF (NR2F1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000360.1 NR2F1 ENCSR662EOU HepG2 Homo sapiens
BP000719.1 NR2F1 ENCSR136OFY HepG2 Homo sapiens
BP001148.1 NR2F1 ENCSR970NKQ K562 Homo sapiens
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