Detailed information of deep learning profile BP000950.1

This page shows detailed deep learning-derived predictions and motifs for NR2F1 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR2F1
Model ID: BP000950.1
Cell line/tissue: GM12878
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Best Match(es): MA0017.2 MA1537.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P10589  
Source: ENCSR514VYD
Model: BPNet

Contribution weight matrix (CWM)

A [ -4.08e-05 -8.87e-05 -1.76e-04 -1.30e-04 -2.18e-05 5.64e-05 3.44e-02 -1.14e-05 -9.11e-06 1.76e-06 -4.12e-04 ]
C [ 6.01e-03 3.32e-03 1.72e-03 -1.19e-03 1.53e-04 1.40e-05 7.01e-06 4.12e-02 3.79e-02 4.52e-03 4.26e-03 ]
G [ 1.70e-03 1.03e-03 6.72e-04 1.51e-03 -9.47e-06 3.21e-02 -8.78e-06 0.00e+00 6.94e-07 9.50e-07 -1.43e-04 ]
T [ -3.06e-04 1.05e-03 1.85e-03 1.92e-03 3.15e-02 6.19e-07 -4.57e-07 -4.28e-06 -7.10e-06 1.40e-02 3.30e-03 ]

Frequency matrix

A [ 24125 23376 20957 18749 1826 9569 101071 6547 7161 6222 14229 ]
C [ 39419 38784 39133 37441 5036 7913 9266 109850 104539 35581 47484 ]
G [ 27766 23276 22018 30217 917 99662 7048 107 971 3604 16086 ]
T [ 26117 31990 35320 31020 109648 282 42 924 4756 72021 39627 ]

3 profiles found for the same TF (NR2F1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000360.1 NR2F1 ENCSR662EOU HepG2 Homo sapiens
BP000719.1 NR2F1 ENCSR136OFY HepG2 Homo sapiens
BP001148.1 NR2F1 ENCSR970NKQ K562 Homo sapiens
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