This page shows detailed deep learning-derived predictions and motifs for CTCF in Peyer's patch using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000953.1 |
| Cell line/tissue: | Peyer's patch |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR568IVD |
| Model: | BPNet |
| A [ | -8.50e-04 | -2.93e-03 | -2.80e-03 | -3.77e-04 | -4.76e-04 | 6.13e-03 | -3.92e-04 | -2.33e-04 | -1.79e-03 | 1.97e-02 | -1.50e-03 | -4.86e-03 | -5.77e-04 | -2.46e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.22e-03 | 5.21e-02 | -4.31e-04 | 1.01e-01 | 1.54e-01 | 4.97e-02 | 6.55e-02 | 1.59e-01 | 4.09e-04 | -2.41e-03 | 9.63e-03 | 6.49e-03 | -3.36e-04 | -2.00e-03 | ] |
| G [ | 2.85e-02 | -5.19e-04 | 8.21e-02 | 3.68e-04 | -1.10e-04 | -3.78e-04 | -1.33e-04 | -6.99e-05 | -3.12e-04 | 1.40e-02 | 5.74e-02 | -7.15e-04 | 1.60e-01 | 8.48e-02 | ] |
| T [ | -2.52e-03 | 9.30e-03 | -2.69e-03 | -1.48e-03 | -7.45e-04 | -3.23e-03 | 1.60e-02 | -2.98e-04 | 7.58e-02 | -4.91e-03 | -1.78e-03 | 2.50e-02 | -7.10e-04 | -1.68e-03 | ] |
| A [ | 3425 | 1787 | 3027 | 2851 | 397 | 12252 | 321 | 102 | 1727 | 12900 | 937 | 4408 | 195 | 2082 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 10949 | 17412 | 1290 | 29945 | 34102 | 19710 | 21164 | 34853 | 2348 | 2684 | 11776 | 5473 | 176 | 1932 | ] |
| G [ | 17292 | 1856 | 25969 | 1393 | 212 | 1365 | 271 | 43 | 952 | 14456 | 20578 | 1365 | 34197 | 28016 | ] |
| T [ | 3534 | 14146 | 4915 | 1011 | 490 | 1874 | 13445 | 203 | 30175 | 5161 | 1909 | 23955 | 633 | 3171 | ] |
