Detailed information of deep learning profile BP000955.1

This page shows detailed deep learning-derived predictions and motifs for NFYA in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NFYA
Model ID: BP000955.1
Cell line/tissue: HeLa-S3
Class: Heteromeric CCAAT-binding factors
Family: Heteromeric CCAAT-binding
Best Match(es): MA0060.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P23511  
Source: ENCSR000DNS
Model: BPNet

Contribution weight matrix (CWM)

A [ -4.13e-04 -3.09e-04 1.05e-01 -8.51e-06 6.94e-06 -4.42e-05 1.98e-04 -9.32e-04 -9.84e-04 ]
C [ 1.55e-02 4.27e-04 -4.69e-06 -1.50e-04 -3.00e-06 -4.47e-05 -2.72e-05 9.44e-03 6.75e-03 ]
G [ -1.84e-03 1.36e-02 7.56e-05 -1.08e-04 -2.67e-05 7.19e-02 7.86e-02 -1.78e-03 -8.17e-04 ]
T [ 1.65e-02 -7.07e-04 -3.41e-06 8.65e-02 8.86e-02 -6.87e-05 -1.05e-05 4.79e-03 8.44e-03 ]

Frequency matrix

A [ 520 1240 15992 390 980 340 714 2381 1605 ]
C [ 5809 4767 24 887 171 448 268 7903 6039 ]
G [ 2318 8585 675 910 94 15694 15699 1805 2835 ]
T [ 8109 2165 65 14569 15511 274 75 4667 6276 ]

Other motif patterns

3 profiles found for the same TF (NFYA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000403.1 NFYA ENCSR163VTS K562 Homo sapiens
BP000638.1 NFYA ENCSR000EGR K562 Homo sapiens
BP000651.1 NFYA ENCSR124APT HepG2 Homo sapiens
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