This page shows detailed deep learning-derived predictions and motifs for CTCF in pancreas using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000956.1 |
| Cell line/tissue: | pancreas |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR774PGN |
| Model: | BPNet |
| A [ | -1.28e-03 | -2.75e-03 | -3.11e-03 | -7.07e-04 | -4.67e-04 | 5.15e-03 | -3.67e-04 | -2.13e-04 | -1.91e-03 | 1.84e-02 | -1.61e-03 | -4.81e-03 | -4.71e-04 | -2.76e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.25e-02 | 5.07e-02 | -1.63e-04 | 9.98e-02 | 1.58e-01 | 5.06e-02 | 6.77e-02 | 1.67e-01 | 3.63e-04 | -2.25e-03 | 1.22e-02 | 7.00e-03 | -2.13e-04 | -1.70e-03 | ] |
| G [ | 2.77e-02 | -1.66e-04 | 8.36e-02 | 4.69e-04 | -1.07e-04 | -3.32e-04 | -4.23e-05 | -4.73e-05 | -2.58e-04 | 1.63e-02 | 6.38e-02 | -4.50e-04 | 1.64e-01 | 9.13e-02 | ] |
| T [ | -2.85e-03 | 9.30e-03 | -1.93e-03 | -1.10e-03 | -5.85e-04 | -2.83e-03 | 1.69e-02 | -2.47e-04 | 7.70e-02 | -5.41e-03 | -1.82e-03 | 2.48e-02 | -6.81e-04 | -1.66e-03 | ] |
| A [ | 2599 | 1365 | 2406 | 2252 | 253 | 10614 | 207 | 99 | 1372 | 10722 | 764 | 3291 | 151 | 1663 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9079 | 14325 | 899 | 25148 | 28436 | 16174 | 17512 | 28831 | 1857 | 2113 | 9591 | 4317 | 140 | 1542 | ] |
| G [ | 14598 | 1395 | 21966 | 980 | 117 | 1007 | 187 | 51 | 781 | 12046 | 17358 | 1107 | 28420 | 23326 | ] |
| T [ | 2884 | 12075 | 3890 | 780 | 354 | 1365 | 11254 | 179 | 25151 | 4279 | 1447 | 20445 | 449 | 2629 | ] |