This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000960.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR724YTA |
| Model: | BPNet |
| A [ | -1.77e-03 | -3.98e-03 | -3.50e-03 | -4.77e-04 | -5.88e-04 | 7.38e-03 | -5.16e-04 | -3.57e-04 | -2.61e-03 | 2.06e-02 | -2.39e-03 | -6.37e-03 | -7.31e-04 | -3.29e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.48e-02 | 6.10e-02 | -6.14e-04 | 1.25e-01 | 1.86e-01 | 5.66e-02 | 7.24e-02 | 1.90e-01 | 9.94e-04 | -2.27e-03 | 1.37e-02 | 8.60e-03 | -3.64e-04 | -2.10e-03 | ] |
| G [ | 3.51e-02 | -6.39e-04 | 1.05e-01 | 2.19e-04 | -1.04e-05 | 4.31e-04 | 2.50e-05 | -4.93e-05 | -1.32e-05 | 1.75e-02 | 6.16e-02 | -4.81e-04 | 1.86e-01 | 9.28e-02 | ] |
| T [ | -3.26e-03 | 9.25e-03 | -3.78e-03 | -1.56e-03 | -8.71e-04 | -4.46e-03 | 2.06e-02 | -5.22e-04 | 7.32e-02 | -5.96e-03 | -1.98e-03 | 2.55e-02 | -9.07e-04 | -1.68e-03 | ] |
| A [ | 3980 | 1992 | 2936 | 3317 | 93 | 14231 | 439 | 56 | 2522 | 14785 | 1382 | 5427 | 104 | 2926 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 13279 | 19324 | 1143 | 34490 | 39835 | 22333 | 22223 | 40043 | 3182 | 3709 | 14093 | 6478 | 89 | 2999 | ] |
| G [ | 19074 | 1884 | 30897 | 1504 | 54 | 1503 | 537 | 19 | 1376 | 15316 | 22235 | 1811 | 39552 | 30203 | ] |
| T [ | 3902 | 17035 | 5259 | 924 | 253 | 2168 | 17036 | 117 | 33155 | 6425 | 2524 | 26520 | 490 | 4107 | ] |
