Detailed information of deep learning profile BP000961.1

This page shows detailed deep learning-derived predictions and motifs for E2F8 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: E2F8
Model ID: BP000961.1
Cell line/tissue: GM12878
Class: Fork head/winged helix factors
Family: E2F
Best Match(es): MA0865.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: A0AVK6  
Source: ENCSR793HVL
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.03e-04 -3.88e-05 2.66e-05 -1.62e-05 0.00e+00 -1.13e-06 8.76e-04 1.78e-02 1.13e-02 5.60e-03 ]
C [ 7.57e-04 4.42e-03 2.67e-04 3.29e-02 0.00e+00 2.14e-03 3.30e-04 -3.45e-05 -7.36e-05 1.45e-05 ]
G [ 6.42e-04 6.21e-03 2.00e-02 2.04e-05 3.45e-02 1.29e-02 1.19e-02 1.65e-04 5.60e-04 -4.94e-04 ]
T [ 6.00e-03 -3.05e-05 0.00e+00 0.00e+00 0.00e+00 7.83e-07 -1.75e-05 2.71e-05 -7.43e-06 6.66e-04 ]

Frequency matrix

A [ 4337 2893 1767 11 1 823 4477 12199 7364 5809 ]
C [ 5039 6595 3635 21082 0 4704 4286 1693 4121 5288 ]
G [ 6332 8959 15252 34 21135 13212 9687 4474 6260 4831 ]
T [ 5428 2689 482 9 0 2396 2686 2771 3391 5208 ]

3 profiles found for the same TF (E2F8) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000667.1 E2F8 ENCSR634GEO HepG2 Homo sapiens
BP000729.1 E2F8 ENCSR953DVM K562 Homo sapiens
BP001105.1 E2F8 ENCSR897ZXU MCF-7 Homo sapiens
Showing 3 profiles of page 1 from 1 pages
  • 1 (current)