This page shows detailed deep learning-derived predictions and motifs for CTCF in B cell using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000964.1 |
| Cell line/tissue: | B cell |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR075NRV |
| Model: | BPNet |
| A [ | -6.43e-04 | -2.74e-03 | -2.34e-03 | -4.16e-05 | -2.94e-04 | 5.97e-03 | -3.79e-04 | -1.62e-04 | -1.96e-03 | 1.70e-02 | -1.53e-03 | -4.21e-03 | -5.91e-04 | -1.82e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7.81e-03 | 4.62e-02 | -1.73e-04 | 8.98e-02 | 1.40e-01 | 4.81e-02 | 6.37e-02 | 1.43e-01 | 1.67e-04 | -2.06e-03 | 8.35e-03 | 5.96e-03 | -3.51e-04 | -2.14e-03 | ] |
| G [ | 2.42e-02 | -1.76e-04 | 7.34e-02 | 6.06e-04 | -9.23e-05 | -2.96e-04 | -1.16e-04 | -3.61e-05 | -2.48e-04 | 1.34e-02 | 5.05e-02 | -4.35e-04 | 1.44e-01 | 7.91e-02 | ] |
| T [ | -1.90e-03 | 7.33e-03 | -1.98e-03 | -1.16e-03 | -5.33e-04 | -2.97e-03 | 1.52e-02 | -2.96e-04 | 7.06e-02 | -4.12e-03 | -1.27e-03 | 2.25e-02 | -6.56e-04 | -1.34e-03 | ] |
| A [ | 3289 | 1769 | 2825 | 2708 | 222 | 11296 | 338 | 57 | 1594 | 11719 | 861 | 4381 | 2 | 1837 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9961 | 16197 | 1275 | 27607 | 32081 | 18613 | 19522 | 32521 | 2075 | 2532 | 10939 | 4661 | 1 | 1682 | ] |
| G [ | 15984 | 1960 | 24024 | 1464 | 101 | 1094 | 320 | 24 | 986 | 13668 | 19289 | 1297 | 32710 | 26348 | ] |
| T [ | 3487 | 12795 | 4596 | 942 | 317 | 1718 | 12541 | 119 | 28066 | 4801 | 1632 | 22382 | 8 | 2854 | ] |
