Detailed information of deep learning profile BP000968.1

This page shows detailed deep learning-derived predictions and motifs for USF1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: USF1
Model ID: BP000968.1
Cell line/tissue: A549
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Best Match(es): MA0093.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P22415  
Source: ENCSR000BJB
Model: BPNet

Contribution weight matrix (CWM)

A [ 4.25e-03 -6.70e-04 -3.50e-06 1.14e-01 6.21e-06 5.54e-03 -3.54e-04 1.59e-06 1.11e-02 -2.61e-03 ]
C [ -7.26e-04 1.68e-03 1.49e-01 3.24e-06 1.03e-01 2.37e-06 4.60e-04 4.25e-05 -1.65e-03 2.19e-02 ]
G [ 4.51e-02 -5.18e-04 3.75e-05 8.15e-05 5.82e-05 8.07e-02 -3.56e-04 1.47e-01 4.14e-03 -5.24e-04 ]
T [ -1.01e-03 4.75e-02 2.81e-05 -3.24e-05 1.28e-03 -1.34e-05 9.29e-02 -2.90e-05 -3.29e-03 3.84e-03 ]

Frequency matrix

A [ 6791 1951 95 28030 79 7101 1102 21 11316 2435 ]
C [ 3711 7526 28878 236 22862 1980 1078 46 5020 13733 ]
G [ 17165 3965 21 458 1725 19752 847 28741 9659 5230 ]
T [ 1337 15562 10 280 4338 171 25976 196 3009 7606 ]

13 profiles found for the same TF (USF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP001031.1 USF1 ENCSR787CHF K562 Homo sapiens
BP001122.1 USF1 ENCSR248QBT WTC11 Homo sapiens
BP001205.1 USF1 ENCSR000BKT K562 Homo sapiens
Showing 3 profiles of page 2 from 2 pages