Detailed information of deep learning profile BP000970.1

This page shows detailed deep learning-derived predictions and motifs for THRA in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: THRA
Model ID: BP000970.1
Cell line/tissue: HepG2
Class: Nuclear receptors with C4 zinc fingers
Family: Thyroid hormone receptor-related factors (NR1)
Best Match(es): MA1969.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P10827  
Source: ENCSR551QJT
Model: BPNet

Contribution weight matrix (CWM)

A [ -2.00e-04 6.50e-03 1.85e-02 2.81e-02 -1.82e-06 0.00e+00 -7.58e-06 5.21e-06 2.88e-02 ]
C [ 9.82e-03 2.89e-03 -1.60e-05 0.00e+00 0.00e+00 0.00e+00 -1.25e-05 3.60e-02 0.00e+00 ]
G [ -7.64e-05 -3.00e-04 1.28e-03 1.33e-04 4.23e-02 3.64e-02 -1.05e-05 0.00e+00 4.58e-05 ]
T [ 7.17e-04 8.67e-05 -2.98e-05 0.00e+00 0.00e+00 3.71e-05 2.66e-02 1.66e-04 -1.64e-05 ]

Frequency matrix

A [ 5469 10370 16536 26855 253 504 3092 338 29502 ]
C [ 13461 9239 3050 170 14 76 3421 29509 556 ]
G [ 5235 3550 10399 4257 31212 28663 1689 293 827 ]
T [ 7342 8347 1523 225 28 2264 23305 1367 622 ]

Alternative motif patterns (AMPs)

1 profiles found for the same TF (THRA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP001098.1 THRA ENCSR264CZJ K562 Homo sapiens
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