This page shows detailed deep learning-derived predictions and motifs for CTCF in activated CD4-positive and alpha-beta T cell using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000971.1 |
| Cell line/tissue: | activated CD4-positive and alpha-beta T cell |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR806WWX |
| Model: | BPNet |
| A [ | -2.32e-04 | -2.23e-03 | -2.25e-03 | -1.14e-04 | -5.40e-04 | 4.06e-03 | -4.12e-04 | -2.64e-04 | -1.58e-03 | 1.72e-02 | -1.46e-03 | -4.12e-03 | -6.67e-04 | -1.96e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 6.56e-03 | 3.80e-02 | 1.10e-04 | 7.60e-02 | 1.16e-01 | 4.25e-02 | 6.02e-02 | 1.28e-01 | 8.27e-04 | -1.81e-03 | 9.56e-03 | 4.50e-03 | -3.32e-04 | -1.38e-03 | ] |
| G [ | 2.14e-02 | 4.27e-04 | 5.86e-02 | 7.75e-04 | -7.50e-05 | -1.70e-04 | -1.36e-04 | -6.94e-05 | -1.90e-04 | 1.21e-02 | 4.22e-02 | -8.98e-05 | 1.27e-01 | 6.83e-02 | ] |
| T [ | -1.83e-03 | 4.63e-03 | -1.80e-03 | -1.35e-03 | -6.75e-04 | -3.45e-03 | 1.11e-02 | -2.64e-04 | 5.91e-02 | -3.36e-03 | -1.09e-03 | 1.94e-02 | -8.40e-04 | -1.25e-03 | ] |
| A [ | 5869 | 3364 | 4699 | 4209 | 760 | 15766 | 558 | 94 | 2963 | 17857 | 1475 | 7746 | 127 | 2928 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 14438 | 23250 | 2729 | 39703 | 47192 | 27964 | 31394 | 48742 | 3810 | 3827 | 16952 | 6693 | 89 | 2864 | ] |
| G [ | 23094 | 4053 | 33877 | 3227 | 452 | 2010 | 472 | 39 | 1294 | 20107 | 27583 | 2505 | 48334 | 38853 | ] |
| T [ | 5630 | 18365 | 7727 | 1893 | 628 | 3292 | 16607 | 157 | 40965 | 7241 | 3023 | 32087 | 482 | 4387 | ] |
