This page shows detailed deep learning-derived predictions and motifs for CTCF in breast epithelium using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000974.1 |
| Cell line/tissue: | breast epithelium |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR304XUZ |
| Model: | BPNet |
| A [ | -9.21e-04 | -1.44e-03 | -1.87e-03 | -8.66e-04 | -3.53e-04 | 2.67e-04 | -2.03e-04 | -1.41e-04 | -1.26e-03 | 9.43e-03 | -8.84e-04 | -2.91e-03 | -1.82e-04 | -1.41e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7.10e-03 | 3.59e-02 | -9.14e-05 | 6.98e-02 | 1.05e-01 | 3.36e-02 | 5.24e-02 | 1.18e-01 | 2.74e-04 | -1.56e-03 | 5.50e-03 | 5.70e-03 | -5.06e-05 | -9.70e-04 | ] |
| G [ | 1.54e-02 | -4.65e-04 | 5.84e-02 | -2.76e-05 | 3.81e-06 | 8.61e-05 | -1.31e-05 | -3.31e-06 | -1.16e-04 | 1.45e-02 | 5.15e-02 | -2.62e-04 | 1.29e-01 | 7.47e-02 | ] |
| T [ | -1.66e-03 | 5.03e-03 | -1.57e-03 | -8.16e-04 | -5.14e-04 | -1.63e-03 | 7.99e-03 | -2.01e-04 | 5.39e-02 | -4.12e-03 | -9.71e-04 | 1.94e-02 | -2.54e-04 | -1.61e-03 | ] |
| A [ | 1860 | 1021 | 1541 | 1460 | 199 | 6650 | 194 | 68 | 982 | 6464 | 489 | 2220 | 54 | 929 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 6166 | 9465 | 741 | 16189 | 18508 | 10492 | 11972 | 18809 | 1287 | 1457 | 5951 | 2657 | 56 | 883 | ] |
| G [ | 8877 | 1079 | 14108 | 751 | 106 | 890 | 171 | 30 | 641 | 8314 | 11689 | 828 | 18790 | 15656 | ] |
| T [ | 2145 | 7483 | 2657 | 648 | 235 | 1016 | 6711 | 141 | 16138 | 2813 | 919 | 13343 | 148 | 1580 | ] |
