This page shows detailed deep learning-derived predictions and motifs for CTCF in BJ using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000975.1 |
| Cell line/tissue: | BJ |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DQI |
| Model: | BPNet |
| A [ | -9.74e-04 | -4.04e-03 | -3.64e-03 | -1.09e-03 | -1.02e-03 | 2.58e-03 | -8.90e-04 | -4.03e-04 | -2.90e-03 | 2.23e-02 | -2.60e-03 | -6.82e-03 | -9.72e-04 | -3.51e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.19e-02 | 5.87e-02 | 3.58e-04 | 1.18e-01 | 1.92e-01 | 6.77e-02 | 9.12e-02 | 2.14e-01 | 1.12e-03 | -2.77e-03 | 1.50e-02 | 7.50e-03 | -6.23e-04 | -2.45e-03 | ] |
| G [ | 3.23e-02 | 5.74e-04 | 8.73e-02 | 1.36e-03 | -1.07e-04 | -3.31e-04 | -1.83e-04 | -9.33e-05 | -3.24e-04 | 2.21e-02 | 7.04e-02 | 6.63e-04 | 2.06e-01 | 1.13e-01 | ] |
| T [ | -3.23e-03 | 7.15e-03 | -3.36e-03 | -2.22e-03 | -1.31e-03 | -5.88e-03 | 1.63e-02 | -4.58e-04 | 9.12e-02 | -6.23e-03 | -2.08e-03 | 2.61e-02 | -1.54e-03 | -2.20e-03 | ] |
| A [ | 7305 | 4276 | 5771 | 4933 | 1226 | 16763 | 995 | 257 | 3906 | 20273 | 1937 | 9609 | 65 | 3570 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 16983 | 27604 | 3780 | 45447 | 54330 | 33131 | 35912 | 56999 | 5459 | 5449 | 20335 | 8220 | 95 | 3754 | ] |
| G [ | 26554 | 5370 | 37779 | 4456 | 955 | 2774 | 789 | 102 | 1978 | 22970 | 31779 | 3238 | 57215 | 45411 | ] |
| T [ | 6970 | 20562 | 10482 | 2976 | 1301 | 5143 | 20116 | 454 | 46468 | 9120 | 3761 | 36745 | 437 | 5077 | ] |
