This page shows detailed deep learning-derived predictions and motifs for CTCF in upper lobe of left lung using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000976.1 |
| Cell line/tissue: | upper lobe of left lung |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR463XCZ |
| Model: | BPNet |
| A [ | -9.66e-04 | -2.81e-03 | -3.05e-03 | -4.99e-04 | -5.72e-04 | 3.96e-03 | -4.59e-04 | -2.25e-04 | -2.05e-03 | 1.74e-02 | -1.61e-03 | -5.22e-03 | -5.08e-04 | -2.77e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.10e-02 | 4.74e-02 | -2.87e-05 | 9.62e-02 | 1.47e-01 | 5.01e-02 | 6.38e-02 | 1.60e-01 | 5.49e-04 | -1.87e-03 | 1.05e-02 | 7.01e-03 | -2.21e-04 | -1.58e-03 | ] |
| G [ | 2.66e-02 | -9.58e-05 | 7.70e-02 | 7.29e-04 | -1.84e-05 | -5.09e-06 | -9.64e-05 | -3.51e-05 | -9.60e-05 | 1.52e-02 | 5.92e-02 | -8.01e-04 | 1.65e-01 | 8.99e-02 | ] |
| T [ | -2.69e-03 | 7.20e-03 | -2.16e-03 | -1.47e-03 | -7.97e-04 | -3.44e-03 | 1.58e-02 | -4.07e-04 | 7.21e-02 | -4.96e-03 | -1.71e-03 | 2.50e-02 | -7.75e-04 | -1.61e-03 | ] |
| A [ | 3351 | 1774 | 2872 | 2702 | 146 | 11823 | 405 | 97 | 1690 | 12595 | 919 | 4387 | 53 | 2000 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 10901 | 16795 | 1172 | 29254 | 33919 | 19397 | 20071 | 34052 | 2390 | 2597 | 11491 | 4950 | 41 | 1846 | ] |
| G [ | 16552 | 1830 | 25257 | 1512 | 64 | 1299 | 359 | 47 | 1002 | 14039 | 20211 | 1316 | 34104 | 27529 | ] |
| T [ | 3594 | 13999 | 5097 | 930 | 269 | 1878 | 13563 | 202 | 29316 | 5168 | 1777 | 23745 | 200 | 3023 | ] |
