This page shows detailed deep learning-derived predictions and motifs for CTCF in nephron progenitor cell using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000982.1 |
| Cell line/tissue: | nephron progenitor cell |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR799GJD |
| Model: | BPNet |
| A [ | -1.59e-03 | -3.16e-03 | -3.01e-03 | -6.05e-04 | -3.65e-04 | 4.62e-03 | -5.10e-04 | -2.48e-04 | -2.26e-03 | 1.71e-02 | -1.76e-03 | -5.81e-03 | -5.87e-04 | -2.77e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.08e-02 | 5.12e-02 | -5.39e-04 | 9.88e-02 | 1.55e-01 | 5.31e-02 | 6.93e-02 | 1.62e-01 | 7.17e-04 | -2.20e-03 | 1.18e-02 | 5.78e-03 | -2.80e-04 | -1.76e-03 | ] |
| G [ | 2.98e-02 | -1.57e-04 | 8.35e-02 | 2.18e-05 | -6.02e-05 | -3.76e-04 | -1.47e-04 | -4.76e-05 | -3.86e-04 | 1.58e-02 | 5.42e-02 | -2.71e-04 | 1.62e-01 | 8.66e-02 | ] |
| T [ | -2.56e-03 | 5.80e-03 | -2.59e-03 | -1.22e-03 | -6.90e-04 | -4.30e-03 | 1.40e-02 | -3.49e-04 | 7.66e-02 | -4.71e-03 | -1.97e-03 | 2.33e-02 | -8.18e-04 | -1.58e-03 | ] |
| A [ | 3353 | 1916 | 2924 | 2822 | 225 | 12703 | 288 | 103 | 1924 | 12866 | 1111 | 4897 | 52 | 2246 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 10945 | 17734 | 957 | 31549 | 35374 | 20048 | 21668 | 35602 | 2482 | 2740 | 12695 | 4409 | 56 | 2162 | ] |
| G [ | 18060 | 1776 | 27049 | 847 | 60 | 1144 | 194 | 45 | 883 | 14877 | 20049 | 1659 | 35734 | 28202 | ] |
| T [ | 3621 | 14554 | 5050 | 762 | 321 | 2084 | 13830 | 230 | 30692 | 5498 | 2125 | 25015 | 138 | 3369 | ] |
